Gene Mboo_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0061 
Symbol 
ID5410270 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp54480 
End bp55640 
Gene Length1161 bp 
Protein Length386 aa 
Translation table11 
GC content52% 
IMG OID640867275 
Producthypothetical protein 
Protein accessionYP_001403228 
Protein GI154149610 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTC TGATCAGACT TATCCTTCTC ACCCTTGCCC TGCTTGCTCT GACGGGGGAG 
GCCACAGCGC TGGCTACTTC CGCAGAGATT AACGCCGCCA ACAATGTCTA CGTCTCCAAC
GTGACCTATG ATCCCGGTTC CTTTTTTACC GGGGATGCCG GGACCGTAAC AGTTGCAGTC
ACCAACGGGA ACGCCAATCA GAGCATCGTA GCCAACCATG CTACATTCGG TTTCGATAAT
AATTTCCAGC TCACCAGCGG GTCCTACGAC ACCTCATCGA CCGTCGGCCC GCTCCAGACA
CGGACATACA CGTTCTCGGT AATTACCCAG TCCGCCGATG GCAGCTACTA CCCGACGTTT
TCTCTTAATA TCGGTGATGC CACCAGTATT TACTACCGGG GACTTGTAAA GGTGGATAAT
ACTCCCATTG TTGCAACCCT GATCGATAAG CCGGATGCAT TCACCCCGGC CACCAAGAAC
ACGCTCTCGC TCCAGCTTGC CAATCCCCGC GAGGATGATG TGAAAAACGT CATCGTTGAT
GTAGATGGGG GAAGCGGGGC AGACATCCTC CCCGCCACGC AATATATCGG GGTGCTTTCC
TCCGGCGCGA GTACCGTAGT GAATTTCACG GTAACACCGA ACGTCGAGAC CACCCTTAAT
GTAACCGTGA AGTACGACAA CGGGGACAAT CATCATTCGG TAGATCTGAA GATCCCGGTG
GCATTTACCA CGGATAAAAT GCAGGCCGAC CCGGTGATGA GCAATATTGT TATTGCACTC
ACCAATGGAA CCTGTGACGT TACCGGAGAT ATAACCAATG CCGGCCTCTC GAACGCAAAT
GGTGTTACCG TTACATCACT TTCGCCTGCC ATACCACAGG AACCTGACAG AAATTATGTC
ATCGGTACAC TCAAGCCGGA TGACTTTGGC AGTTTCGAGA TCACCTTTAC TGTACCGGAC
GGCACGACAA GCGTGCCCCT CCAGTTATCA TACAAAGACA GTGACGGTAA TATCCTCTCC
TCAGTCCAGA ATATCGATCT CACCCAGACC ACTGCACAAC CTAACTCACA GCCAAGCATG
CTCCCGGTAC TGGTGGTCGT CATTATCGCT GTGATCTTTG TGGGCGGATG GTATGTGTAC
CTGAGAAGGC ACAAAGAGTG A
 
Protein sequence
MKILIRLILL TLALLALTGE ATALATSAEI NAANNVYVSN VTYDPGSFFT GDAGTVTVAV 
TNGNANQSIV ANHATFGFDN NFQLTSGSYD TSSTVGPLQT RTYTFSVITQ SADGSYYPTF
SLNIGDATSI YYRGLVKVDN TPIVATLIDK PDAFTPATKN TLSLQLANPR EDDVKNVIVD
VDGGSGADIL PATQYIGVLS SGASTVVNFT VTPNVETTLN VTVKYDNGDN HHSVDLKIPV
AFTTDKMQAD PVMSNIVIAL TNGTCDVTGD ITNAGLSNAN GVTVTSLSPA IPQEPDRNYV
IGTLKPDDFG SFEITFTVPD GTTSVPLQLS YKDSDGNILS SVQNIDLTQT TAQPNSQPSM
LPVLVVVIIA VIFVGGWYVY LRRHKE