Gene Mboo_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0058 
Symbol 
ID5410267 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp51669 
End bp52532 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content55% 
IMG OID640867272 
Productmethyltransferase type 11 
Protein accessionYP_001403225 
Protein GI154149607 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGAAC CTGCCCTCAG TTGCGAGTAT GGCGATATTG ACTGGAACGA GGTATGGAAG 
GCCCGGCAGG ATCAGCACGA AACTGCAAGG ATCGCTCTGG ATACCTCGCA CGACTGGGAC
AAAAAAGAGA ATGCAACCCG GTACGCGGCC CAGTCCGTTG GGGAATTTGA AACGCGTATC
CGAATGACCC TGGACGATCT TGTAGTCAAT TCCTCAACCC GGGTACTGGA TATCGGCGCC
GGGCCGGGCA CACTCGCAAT CCCGCTCGCT CCTAAGGTAA AGGAGATCAC CGCGGTGGAA
CCCGGGGCGG GAATGATTAT CGCGCTTGAG GAGCGAGCCG GAAAAGAGGG GATCAACAAC
ATTACCTGTG TCCGGAAGAC CTGGGAAGAG GTTGATCCCA CCCGGGATAT CGAAGGCCCG
TACGATCTCG TAATCGCTTC CCTTTCGCTT ACCATGCATG ATATACGGGA AGCGATCCGG
AAGATGGATG CGGTCTCACG CGGCGAGATC TGTCTCTACT GGTTCGTGGA CCTCCCCTTC
TGGGAGCGGA TGTATGCCGA CCTCATGATC CCACTCCACG GGAGGCCCTA TTATTCCGGG
CCAAAAGCAG ACTGCCTCTG GAACGTGCTG TACCAAGAGG GAATCTATGC GGACGTCAAT
ATGCTCCCGC TGGACAAGGA GTACCGGTTT TCTTTCCGGG AGGAGATGTC AGCGTTTTTC
AAAAAACGGT TTGGGGTGAC TACACCGGCA CAGGAACGGG TGCTGGAAAA TTATCTCTCG
GGACTTGCCC GCACTGAGGG AAATGACGTT GTTATCTCCG GCACGTCAAC ATTTGCAAAA
ATCCGGTGGA AAAAGAAGAG CTAA
 
Protein sequence
MAEPALSCEY GDIDWNEVWK ARQDQHETAR IALDTSHDWD KKENATRYAA QSVGEFETRI 
RMTLDDLVVN SSTRVLDIGA GPGTLAIPLA PKVKEITAVE PGAGMIIALE ERAGKEGINN
ITCVRKTWEE VDPTRDIEGP YDLVIASLSL TMHDIREAIR KMDAVSRGEI CLYWFVDLPF
WERMYADLMI PLHGRPYYSG PKADCLWNVL YQEGIYADVN MLPLDKEYRF SFREEMSAFF
KKRFGVTTPA QERVLENYLS GLARTEGNDV VISGTSTFAK IRWKKKS