Gene Mboo_0055 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0055 
SymbolribH 
ID5410949 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp48459 
End bp48878 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content54% 
IMG OID640867269 
Product6,7-dimethyl-8-ribityllumazine synthase 
Protein accessionYP_001403222 
Protein GI154149604 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0054] Riboflavin synthase beta-chain 
TIGRFAM ID[TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase 


Plasmid Coverage information

Num covering plasmid clones34 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones52 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGCGATA CCAAGCCGAT AAAACTGGGA TTCGTGGTCG CGGAGTTTAA CCGTGACATC 
ACCTACATGA TGGAGATCGA AGCACGGGAG CATGCAGCGT TTTTGGGCGC TGAAGTAACC
GAGTGTCTGT ACGTGCCGGG TGCCTTTGAC ATGCCCCTTG CAATCAAGAA GATGCTTGCC
GCAGGAAAAG TCGATGCAGT CGTCACCGTC GGCTGCGTGA TCGAGGGAGC AACCCAGCAT
GACGAGATTG TCGTGCAACA CGCGGCCCGC AAAATTATAG ACCTCTCCCT GGAGTTCGGG
AAGCCGGTCA CGCTTGGCAT CTCCGGGCCC GGCATGAGCC GTCTCGAAGC AAACGAGAGG
ATTGATTATG CAAAGCGCGC TGTTGAATCT GCAGTAAAGC TTGTCAAAAG ATTGCAATGA
 
Protein sequence
MCDTKPIKLG FVVAEFNRDI TYMMEIEARE HAAFLGAEVT ECLYVPGAFD MPLAIKKMLA 
AGKVDAVVTV GCVIEGATQH DEIVVQHAAR KIIDLSLEFG KPVTLGISGP GMSRLEANER
IDYAKRAVES AVKLVKRLQ