| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0052 |
|---|
| Symbol | |
|---|
| ID | 5410946 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 46377 |
|---|
| End bp | 46769 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640867266 |
|---|
| Product | phosphoribosylaminoimidazole carboxylase |
|---|
| Protein accession | YP_001403219 |
|---|
| Protein GI | 154149601 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
|---|
| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGACG TAAGTATCAT CTGCGGATCT GCATCCGATG CCGCAATTGC CGACAAGGCA
AAGAAGATTC TTGACGAGCA CAAGATCACC TGGGACTACC AGGTCATCTC TGCCCACCGG
GACCCGGACA AACTGGATGC CTATATCAAA AATTGCCCGA GCGGGATCTA TATCGCTATA
GCCGGCCTCT CGGCCGCGCT GCCGGGGGTC ATCGCTTCAA AGACCGACAA GCCGGTGATT
GGGGTTCCGG TCAGCGGGAC CTTGAACGGC CTTGATGCCC TGCTCTCGAT CGTCCAGATG
CCCAAAGGTG TGCCAGTAGC TTGCGTGGGT GTTGATAACG GGGATAACGC GGCACACCTT
GCGATCCGGA TCCTGAAACT CGCAAAGAAT TAG
|
|---|
| Protein sequence | MADVSIICGS ASDAAIADKA KKILDEHKIT WDYQVISAHR DPDKLDAYIK NCPSGIYIAI
AGLSAALPGV IASKTDKPVI GVPVSGTLNG LDALLSIVQM PKGVPVACVG VDNGDNAAHL
AIRILKLAKN
|
|---|
| |