| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0043 |
|---|
| Symbol | |
|---|
| ID | 5411343 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Candidatus Methanoregula boonei 6A8 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009712 |
|---|
| Strand | - |
|---|
| Start bp | 37782 |
|---|
| End bp | 38384 |
|---|
| Gene Length | 603 bp |
|---|
| Protein Length | 200 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640867257 |
|---|
| Product | beta-lactamase domain-containing protein |
|---|
| Protein accession | YP_001403210 |
|---|
| Protein GI | 154149592 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0491] Zn-dependent hydrolases, including glyoxylases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 47 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAGGTCA GGTGGATCCC CGAGCAGGGG GCGCTCGCAA ACTCGTATAT CTTCGGCACG
GTCCTCGTGG ACGCCGGTCT CCTCCCTATG GCAATCCAGC CGTTCAAGGA CACGATCGAT
ACAATAGTCC TTACCCACTG TCACTTCGAC CATACCGCCC ATGTAAAAGA GATCGCCCAT
ATGTGCAAGG CCAAGGTCGC GATCCATCGG GCGGATGCCA TGGGTCTTTT CGAGGATGCA
CAGAGCCTCT CCATGCATTT TGGCGCCCGT TCTCCCGGTA TTGCACCGGA TATCAAACTC
AATGACGGTG ACACCATAGG CGGCCTGACC GTCATCCACA CGCCGGGCCA TACCCCGGGA
AGCATCTGTC TCTGGTCAGA GGCAGACAAG GTGCTCATCA GCGGCGATAC CGTATTTACC
GACGGTGCGT TTGGACGCTA CGATTTCCCC GGCGGGAGCC GGCAGGCGCT GGAAGAGTCC
CTTGACCGGC TTTCTGCCCT CGATGTGGAG GGGCTGTACC CGGGCCACGG CGAGCCGGTG
GACTGCGGCG GGAAACGCCA CATTGCTGCG GCACGGCAAC TCATGAAGGG CGGGTATGGA
TAA
|
|---|
| Protein sequence | MQVRWIPEQG ALANSYIFGT VLVDAGLLPM AIQPFKDTID TIVLTHCHFD HTAHVKEIAH
MCKAKVAIHR ADAMGLFEDA QSLSMHFGAR SPGIAPDIKL NDGDTIGGLT VIHTPGHTPG
SICLWSEADK VLISGDTVFT DGAFGRYDFP GGSRQALEES LDRLSALDVE GLYPGHGEPV
DCGGKRHIAA ARQLMKGGYG
|
|---|
| |