Gene Mboo_0042 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0042 
Symbol 
ID5411342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp37349 
End bp37789 
Gene Length441 bp 
Protein Length146 aa 
Translation table11 
GC content60% 
IMG OID640867256 
Producthypothetical protein 
Protein accessionYP_001403209 
Protein GI154149591 
COG category[S] Function unknown 
COG ID[COG1833] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.899596 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones45 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATAAGG GCATATACTG TCTTGTGGTA AAAAACCCGG CCTGCACCGT TGAGGTTGGG 
GCGCTTGGCC CGGTCTCGTT TGCGGCCGGC TGGCACGGAT ACATTGGTTC TGCCCTTGGT
CCCGGGGGGC TTGTGCGGCT CGAACGTCAT CTCCGGCTCG CTGAGCACCG GGACAAGCGG
CCGAAATGGC ATATCGACTA CCTCCTCTCC GATCTCCGCT TTTCGGTTGC ATATGCGATG
AGCGCCCCGA CTGCCGAACG GCTCGAATGC AGACTCGCTG CCCTCCTTGC CCAAGGTGGG
ACAGGGGTAG ACCGGTTCGG GTGCAGCGAC TGTGACTGCC CCTCCCATCT CCTGCACTGG
CACCGGGACC CAAAAAAAGA GATTATTGCT GCGTTCTCCA GCCTCGGACT TACACCCGGT
ACCAGAACGC GTGATACCTA A
 
Protein sequence
MDKGIYCLVV KNPACTVEVG ALGPVSFAAG WHGYIGSALG PGGLVRLERH LRLAEHRDKR 
PKWHIDYLLS DLRFSVAYAM SAPTAERLEC RLAALLAQGG TGVDRFGCSD CDCPSHLLHW
HRDPKKEIIA AFSSLGLTPG TRTRDT