| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0038 |
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| Symbol | |
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| ID | 5411338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 34139 |
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| End bp | 35227 |
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| Gene Length | 1089 bp |
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| Protein Length | 362 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640867252 |
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| Product | radical SAM domain-containing protein |
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| Protein accession | YP_001403205 |
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| Protein GI | 154149587 |
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| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
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| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
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| TIGRFAM ID | [TIGR00423] radical SAM domain protein, CofH subfamily
[TIGR03551] 7,8-didemethyl-8-hydroxy-5-deazariboflavin synthase, CofH subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACCTG CACTGATCCC CCTGTTAAAC GATTGTCTGG CCGGCCACCG CCTTACCCCG
GAAGAGGGCG AGATCCTCAT GAAGGCCACC GGCCGGGACA TCTTCCGGAT CACCGCGGCC
GCTGACGAGC TGCGCGAGAA GAAAGTCGGC GATATCGTCA CGTATGTGCG CAACCAGAAC
CTGCATGTGA CCAACATCTG CAAGAACCTC TGCGGATTCT GCGGATTTGG CAAGAAGGCA
ACTGACCCCG GTGCCTACTG CCTTGACCGG GATACAATCC AGGCAGGTGT CCGGCTGGCA
GAGAAACGAA AGGTCACCGA GATCTGTTTC CTCTCCGGGG TCCACCCGGG GTTTGGCCTG
GAAAACTACA CGGACCTTAT CGCTGCAGTG CACGAGATCG CCCCGGAGAT CCATATCCAT
GCCTTCAGCC CGGACGAGGT GGCCCACGCG GCAAAGCGGG GCAAACTAAC GACAGCCGAG
GTGCTTGCCG CGCTCAGGGA CGCAGGTCTT GGCTCCCTGC AGGGAACGGC TGCGGAGATC
CTCATCGAGC CGGTCCGAAA AGTCATCTGC CCGCGGAAGG TCTCCGGGCA GGAATGGGCA
CGGATTATCA AGGAGGCTCA TAAACTGGGC ATCCGCTCCT CTGCCACCAT TATGTACGGC
TCGTACGAAT CGGCCCGGGA CCAGGTGGAC CACCTGGCGA TCATCCGGGA GATCCAGGAC
GAAACCCACG GGTTTACCGA GTTTATCCCA ATGTCCTACA TCCACCCCAA CACCCCGCTC
TTTACCGAAG GGATCGCCCG GGCCGGGGCA ACGGGCAGGG AAGACCTCCT CATGATCGCG
GTCTCGCGAC TCTTTCTGGA CAACTTCGAC AATGTCCAGG TCTCGTGGGG CAAGCTCGGC
CTCAAGATGA CGCAGCTTGC GCTCCTCTGC GGTGGAAACG ACCTTGCGGG TACGATGTTC
ACGGACGAGG TCTCCGTGGA TGCGGGAGCC GGGGATGCCA GTTACCTTGC CCCTGAAACC
ATGGAGCGGA TGACCTCCGA TCTTGGCCGG ACCCTCAGGC AGCGGACAAC GCTCTACGAA
CTCGTGTAA
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| Protein sequence | MAPALIPLLN DCLAGHRLTP EEGEILMKAT GRDIFRITAA ADELREKKVG DIVTYVRNQN
LHVTNICKNL CGFCGFGKKA TDPGAYCLDR DTIQAGVRLA EKRKVTEICF LSGVHPGFGL
ENYTDLIAAV HEIAPEIHIH AFSPDEVAHA AKRGKLTTAE VLAALRDAGL GSLQGTAAEI
LIEPVRKVIC PRKVSGQEWA RIIKEAHKLG IRSSATIMYG SYESARDQVD HLAIIREIQD
ETHGFTEFIP MSYIHPNTPL FTEGIARAGA TGREDLLMIA VSRLFLDNFD NVQVSWGKLG
LKMTQLALLC GGNDLAGTMF TDEVSVDAGA GDASYLAPET MERMTSDLGR TLRQRTTLYE
LV
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