Gene Mboo_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0026 
Symbol 
ID5410202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp23328 
End bp23819 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content57% 
IMG OID640867240 
ProductNADH ubiquinone oxidoreductase, 20 kDa subunit 
Protein accessionYP_001403193 
Protein GI154149575 
COG category[C] Energy production and conversion 
COG ID[COG3260] Ni,Fe-hydrogenase III small subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCATACT TACAGAAATC CCCGTGGATC ATCCACTACG ATGCATCGAG CTGCAATGGC 
TGCGATATCG AGATCCTTGC CTGCCTCACT CCCATGTATG ATGTGGAGCG CTTTGGGATC
ATCAACACCG GCAACCCCAA GCACGCGGAT ATCTTTGTGG TGACGGGCTC AGTCAATGAG
CAGAACAAGT ACGTTATCAG GAACATCTAC GACCAGATGC CGGATCCAAA AGTGGTCGTG
GCGATCGGGA TCTGCGCCAC CTCGGGCGGG ATCTTCCGGG AGTGCTACAA TGTGGCCGGC
GGGATCGATA CGATTATCCC GGTGGACGTA TATGTGCCCG GCTGCGCAGC CCGGCCCGAG
TCGATCATCG ACGGGATTGT AAAAGCGCTT GGAGTTCTTG AAGCAAAGAA GGCCGCGATG
GCTACCGGAG CGCCGGCCAA GGTTCCGGCT TCCGCTGTGG CCGCGGAGAA ACAACCCGCA
GGAGGTACAT AA
 
Protein sequence
MAYLQKSPWI IHYDASSCNG CDIEILACLT PMYDVERFGI INTGNPKHAD IFVVTGSVNE 
QNKYVIRNIY DQMPDPKVVV AIGICATSGG IFRECYNVAG GIDTIIPVDV YVPGCAARPE
SIIDGIVKAL GVLEAKKAAM ATGAPAKVPA SAVAAEKQPA GGT