Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mboo_0016 |
Symbol | |
ID | 5411530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Candidatus Methanoregula boonei 6A8 |
Kingdom | Archaea |
Replicon accession | NC_009712 |
Strand | + |
Start bp | 12008 |
End bp | 12793 |
Gene Length | 786 bp |
Protein Length | 261 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 640867230 |
Product | carboxymuconolactone decarboxylase |
Protein accession | YP_001403183 |
Protein GI | 154149565 |
COG category | [S] Function unknown |
COG ID | [COG0599] Uncharacterized homolog of gamma-carboxymuconolactone decarboxylase subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 51 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGACAGATT ATGCTACAAT AGGAAGGAAA AAACTCGAGG AGATCGATGG CAAGGCAGGC GTTGCGGTTG AAGAACGACT CAATGCCATC TGCCCCGATC TTGCACGGTA CCTTATCGAG TATTCGTTTG GCGAGATCTA CGCCCGCGAG GGATTGGATA ACCGGACAAA AGAGCAGGCT GTTGTCGCTG CCCTCACCGC CATGGGCACG GCAGCTCCCC AGCTCAAAGT CCATATCCAC GCGGCGCTCC ACGTCGGATG CACTCCCGAG GAGATCCGGG AGATTATCAT CCAGATGGTC GGGTATGCCG GGTTCCCGGC CACCCTGAAT GCCATGGGAA CTCTCATGGT GGTTCTTTCC GAAACCGGGC AGAACCTCCC GAAGGATTCT GTCCACGCAG GATCCACGGG TCGGTATAAT CGAGGGAGGG AACTGCTCGC GCGGATCGCT CCCGATCAGG AGCGGGTGTT AAAGGAGACC TTCGACCCGA TCAACCCCGA TATAACCCGG TATGTTGTCG AGTTCGGGTA CGGAGACATC TATGCCCGGG GCATCCTGCC GATCCGGAAC CGGCAGGTGG CAACCATTGC GGCGCTTGCC GCAAAGGGAA CGGCCCCTTC GCAGCTCCGG TTCCATATCG GCGGCGGGCT CCGGGCCGGT CTCTCCGAAG CGGAGATCGT GGAGATTATG CTGCTGGTTT CAATCTATGC GGGCTTCCCG GCGGCGTTAA ACGGCATCCT TGCCACCCGC GATGTGGCAG AGGCCCTTAA AGACGAACAA CGGTGA
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Protein sequence | MTDYATIGRK KLEEIDGKAG VAVEERLNAI CPDLARYLIE YSFGEIYARE GLDNRTKEQA VVAALTAMGT AAPQLKVHIH AALHVGCTPE EIREIIIQMV GYAGFPATLN AMGTLMVVLS ETGQNLPKDS VHAGSTGRYN RGRELLARIA PDQERVLKET FDPINPDITR YVVEFGYGDI YARGILPIRN RQVATIAALA AKGTAPSQLR FHIGGGLRAG LSEAEIVEIM LLVSIYAGFP AALNGILATR DVAEALKDEQ R
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