Gene Mboo_0010 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0010 
Symbol 
ID5412093 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp7660 
End bp8340 
Gene Length681 bp 
Protein Length226 aa 
Translation table11 
GC content61% 
IMG OID640867224 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_001403177 
Protein GI154149559 
COG category[C] Energy production and conversion 
COG ID[COG1600] Uncharacterized Fe-S protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones53 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTTCGG AAAGCTCGCA TTTCAGGGAG ATGGCCCGCA GCCTCGGTGC CGATTTTGTC 
GGGATTGCCG ATCCCGAAGG ATTCAACAAT CCCGAGTACA GGGGGAACAG GCCTCAGGAT
TTTGCGCCAT GGATTCGATC CATCATGGTG CTTGGGGTGA TCATCCCCAA GGGTTGTGTC
GACCCCCTCC CGAAGGGCCG GGCCGAGTAC ACCAATACCC TGATGGCTGG CACGGTAACC
CTCCGGGTGA TGGGGTTTGC CCTGGTGCGC GAGCTTGAGA AACAGGGATA CCGTGCAATG
CTCGTCCCCT CGGAAGGAAG CGAGTTTGGA ACCTGGTATG CCAATAAAGA GACGCTCAAA
GCCGATCTCT CGCTCAAATA TGCCGCATGG CTTGCCGGCC TTGGCGAGTA CGGCCTCAAC
CAGCTGCTCA TCACCCGGGA GACCGGCCCC CGGATCAGGA TGACTGCGAT CCTCACAGAT
GCGCCAATCG AGCCGGACCA CCCCTCGGGG AAATCCTTTG TCCGGCCCGA GTGCGCCTCC
TGCCAGAAGT GCGTGAAGAT CTGCCCGGTC AAAGCGCTCT CGGCAGACGG GACCATCCAG
CCGCACCTCT GCCGGGACTA CCTCTTCTCC ACCCTTGGCG GCCTGCGGTG CGGCATGTGC
ATCCGGGTTT GCCCGCTGTA A
 
Protein sequence
MISESSHFRE MARSLGADFV GIADPEGFNN PEYRGNRPQD FAPWIRSIMV LGVIIPKGCV 
DPLPKGRAEY TNTLMAGTVT LRVMGFALVR ELEKQGYRAM LVPSEGSEFG TWYANKETLK
ADLSLKYAAW LAGLGEYGLN QLLITRETGP RIRMTAILTD APIEPDHPSG KSFVRPECAS
CQKCVKICPV KALSADGTIQ PHLCRDYLFS TLGGLRCGMC IRVCPL