| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mboo_0008 |
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| Symbol | |
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| ID | 5412091 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Candidatus Methanoregula boonei 6A8 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009712 |
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| Strand | + |
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| Start bp | 6134 |
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| End bp | 7030 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640867222 |
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| Product | pyridoxal biosynthesis lyase PdxS |
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| Protein accession | YP_001403175 |
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| Protein GI | 154149557 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0214] Pyridoxine biosynthesis enzyme |
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| TIGRFAM ID | [TIGR00343] pyridoxal 5'-phosphate synthase, synthase subunit Pdx1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 52 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGCTTG AAGAACTGAG ATTTGGCACT GAGCTGCTCA AACGCGGCTT TGCATCCATG
CAGAAAGGGG GCGTGATCAT GGATGTCGTC AATGCCGAGC AGGCAAAGAT TGCCGAGGCA
GCCGGGGCCG TCGCAGTCAT GTCGCTTGAG CGGGTGCCGT CCGATATCAG GAAAGCGGGC
GGTGTCGCAC GGATGGCAGA CCCCGAGAAG GTCACTGAGA TCATTGAAGC AGTTTCGATC
CCGGTTATGG GTAAAGTCAG GATCGGCCAC TTTGTCGAGG CACAGGTGCT CGAGGTGCTT
GGCGTCGACA TGATCGATGA GAGCGAAGTC CTCACTCCCG CAGACGAGGA ATACCATATC
GATAAGAAAC AGTTCAAGGT CCCGTTTGTC TGCGGGGCAC GGAACCTGGG CGAGGCACTG
CGCCGGGTAA ATGAGGGGGC AGCGATGATC CGCACGAAGG GCGAGGCCGG GACCGGAAAT
GTCGTCGAGG CCGTGCGCCA CATGCGGGCG ATCACGGGAG AGATCCGGAA GATCCAGGGA
ATGGACGATC AGGAGCGGAT CGCCTATGCA CGGAGCATCG AGGCCCCGGC GGAGCTTGTT
GTTGAGAGCG CAAAGCGAGG CCGGCTCCCA GTGGTCAACT TCTCTGCCGG AGGCATTGCC
ACCCCCTCGG ACGCTGCCCT GATGATGCAG CTTGGTGCTG ATGGAGTCTT TGTCGGATCG
GGGATCTTTA AATCCTCGAA CCCCGAGAAG ATGGCAAAAG CGATCGTGGA AGCGGTCAAC
CACTACAACG ATCCCACCGT TATCGCCAGA ATCAGCAAGG GCCTTGGCGA TGCGATGCCC
GGCCTTGATG TCCATACGCT CAGGCCCGAT GAGGTGTTGC AGACCCGTGG GCGATAA
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| Protein sequence | MKLEELRFGT ELLKRGFASM QKGGVIMDVV NAEQAKIAEA AGAVAVMSLE RVPSDIRKAG
GVARMADPEK VTEIIEAVSI PVMGKVRIGH FVEAQVLEVL GVDMIDESEV LTPADEEYHI
DKKQFKVPFV CGARNLGEAL RRVNEGAAMI RTKGEAGTGN VVEAVRHMRA ITGEIRKIQG
MDDQERIAYA RSIEAPAELV VESAKRGRLP VVNFSAGGIA TPSDAALMMQ LGADGVFVGS
GIFKSSNPEK MAKAIVEAVN HYNDPTVIAR ISKGLGDAMP GLDVHTLRPD EVLQTRGR
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