Gene Mboo_0002 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMboo_0002 
Symbol 
ID5411406 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameCandidatus Methanoregula boonei 6A8 
KingdomArchaea 
Replicon accessionNC_009712 
Strand
Start bp1645 
End bp2136 
Gene Length492 bp 
Protein Length163 aa 
Translation table11 
GC content54% 
IMG OID640867216 
ProductAsnC family transcriptional regulator 
Protein accessionYP_001403169 
Protein GI154149551 
COG category[K] Transcription 
COG ID[COG1522] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones32 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones56 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATGACA AGGATCTTGA ACTCCTCCGG ATTCTTGAGG AGAACAGCCG GCTTTCGGCC 
CAGGAAATTG GATCAATGAC CAACCTTATC CCGGCTGAGG TGGAAGCACG GATCCATGCC
CTTGAAGAGA GCCGGATCAT CCGGAAGTAC ACCACGGTCA TTAACTGGGA AAAGGCAGGA
AACGGTGAAG TCTCCGCAAT TATTGAGCTT AAAGTGAGCC CTGAGCGGGA CTTTGGGTAC
GACCGGATTG CCGAGAGGCT CTCCCGGTTC CGCCAGGTGC GCACCCTGCG CCTGATCACT
GGTACTTACG ATCTCCAGCT CATGGTAAGC GGGAAGAATG TCCAGGAGGT ATCGCGTTTT
GTCTCCGAGC ATGTTGCCCC TATGGACCGG ATCCGTGAGA CTGCGACACA CATTGTCATG
AAGTCCTATA AGGAGAACGG CAACACGCTC TTTGAGCAAC AGGAAGCCGA ACGCCTTCCT
TATTCATTCT GA
 
Protein sequence
MDDKDLELLR ILEENSRLSA QEIGSMTNLI PAEVEARIHA LEESRIIRKY TTVINWEKAG 
NGEVSAIIEL KVSPERDFGY DRIAERLSRF RQVRTLRLIT GTYDLQLMVS GKNVQEVSRF
VSEHVAPMDR IRETATHIVM KSYKENGNTL FEQQEAERLP YSF