| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4215 |
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| Symbol | rrsD |
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| ID | 5387936 |
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| Type | rRNA |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1247810 |
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| End bp | 1249364 |
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| Gene Length | 1555 bp |
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| Protein Length | |
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| Translation table | |
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| GC content | 54% |
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| IMG OID | 640864018 |
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| Product | 16S ribosomal RNA |
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| Protein accession | |
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| Protein GI | |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00000000328918 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | AAATTGAAGA GTTTGATCAT GGCTCAGATT GAACGCTGGC GGCAGGCCTA ACACATGCAA
GTCGAGCGGC AGCGGGAAGT AGTTTACTAC TTTGCCGGCG AGCGGCGGAC GGGTGAGTAA
TGTCTGGGGA TCTGCCTGAT GGAGGGGGAT AACTACTGGA AACGGTAGCT AATACCGCAT
GACCTCGCAA GAGCAAAGTG GGGGACCTTA GGGCCTCACG CCATCGGATG AACCCAGATG
GGATTAGCTA GTAGGTGGGG TAATGGCTCA CCTAGGCGAC GATCCCTAGC TGGTCTGAGA
GGATGACCAG CCACACTGGA ACTGAGACAC GGTCCAGACT CCTACGGGAG GCAGCAGTGG
GGAATATTGC ACAATGGGCG CAAGCCTGAT GCAGCCATGC CGCGTGTGTG AAGAAGGCCT
TCGGGTTGTA AAGCACTTTC AGCGAGGAGG AAGGGGTTGA GTTTAATACG CTCAATCATT
GACGTTACTC GCAGAAGAAG CACCGGCTAA CTCCGTGCCA GCAGCCGCGG TAATACGGAG
GGTGCAAGCG TTAATCGGAA TTACTGGGCG TAAAGCGCAC GCAGGCGGTT TGTTAAGTCA
GATGTGAAAT CCCCGCGCTT AACGTGGGAA CTGCATTTGA AACTGGCAAG CTAGAGTCTT
GTAGAGGGGG GTAGAATTCC AGGTGTAGCG GTGAAATGCG TAGAGATCTG GAGGAATACC
GGTGGCGAAG GCGGCCCCCT GGACAAAGAC TGACGCTCAG GTGCGAAAGC GTGGGGAGCA
AACAGGATTA GATACCCTGG TAGTCCACGC TGTAAACGAT GTCGACTTGG AGGTTGTGCC
CTTGAGGCGT GGCTTCCGGA GCTAACGCGT TAAGTCGACC GCCTGGGGAG TACGGCCGCA
AGGTTAAAAC TCAAATGAAT TGACGGGGGC CCGCACAAGC GGTGGAGCAT GTGGTTTAAT
TCGATGCAAC GCGAAGAACC TTACCTACTC TTGACATCCA CAGAATTTGG CAGAGATGCT
AAAGTGCCTT CGGGAACTGT GAGACAGGTG CTGCATGGCT GTCGTCAGCT CGTGTTGTGA
AATGTTGGGT TAAGTCCCGC AACGAGCGCA ACCCTTATCC TTTGTTGCCA GCACGTAATG
GTGGGAACTC AAGGGAGACT GCCGGTGACA AACCGGAGGA AGGTGGGGAT GACGTCAAGT
CATCATGGCC CTTACGAGTA GGGCTACACA CGTGCTACAA TGGCAGATAC AAAGTGAAGC
GAACTCGCGA GAGCCAGCGG ACCACATAAA GTCTGTCGTA GTCCGGATTG GAGTCTGCAA
CTCGACTCCA TGAAGTCGGA ATCGCTAGTA ATCGTAGATC AGAATGCTAC GGTGAATACG
TTCCCGGGCC TTGTACACAC CGCCCGTCAC ACCATGGGAG TGGGTTGCAA AAGAAGTAGG
TAGCTTAACC TTCGGGAGGG CGCTTACCAC TTTGTGATTC ATGACTGGGG TGAAGTCGTA
ACAAGGTAAC CGTAGGGGAA CCTGCGGTTG GATCACCTCC TTACCTAACG ATACG
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| Protein sequence | |
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