Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4206 |
Symbol | rrlC |
ID | 5386205 |
Type | rRNA |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 324859 |
End bp | 327765 |
Gene Length | 2907 bp |
Protein Length | |
Translation table | |
GC content | 53% |
IMG OID | 640863257 |
Product | 23S ribosomal RNA |
Protein accession | |
Protein GI | |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.000822099 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GGTTAAGCGA CTAAGCGTAC ACGGTGGATG CCTAGGCAGT CAGAGGCGAT GAAGGGCGTG CTAATCTGCG AAAAGCGTCG GTAAGCTGAT ATGAAGCGTT ATAACCGACG ATACCCGAAT GGGGAAACCC AGTGCAATAC GTTGCACTAT CGTTAGATGA ATACATAGTC TAACGAGGCG AACCGGGGGA ACTGAAACAT CTAAGTACCC CGAGGAAAAG AAATCAACCG AGATTCCCCC AGTAGCGGCG AGCGAACGGG GAGGAGCCCA GAGTCTGAAT CAGTTTGTGT GTTAGTGGAA GCGTCTGGAA AGTCGCACGG TACAGGGTGA TAGTCCCGTA CACCAAAATG CACAGGCTGT GAACTCGATG AGTAGGGCGG GACACGTGAC ATCCTGTCTG AATATGGGGG GACCATCCTC CAAGGCTAAA TACTCCTGAC TGACCGATAG TGAACCAGTA CCGTGAGGGA AAGGCGAAAA GAACCCCGGC GAGGGGAGTG AAATAGAACC TGAAACCGTG TACGTACAAG CAGTGGGAGC ACCTTCGTGG TGTGACTGCG TACCTTTTGT ATAATGGGTC AGCGACTTAT ATTTTGTAGC AAGGTTAACC GAATAGGGGA GCCGTAGGGA AACCGAGTCT TAACTGGGCG TCTAGTTGCA AGGTATAGAC CCGAAACCCG GTGATCTAGC CATGGGCAGG TTGAAGGTTG GGTAACACTA ACTGGAGGAC CGAACCGACT AATGTTGAAA AATTAGCGGA TGACTTGTGG CTGGGGGTGA AAGGCCAATC AAACCGGGAG ATAGCTGGTT CTCCCCGAAA GCTATTTAGG TAGCGCCTCG TGAACTCATC TTCGGGGGTA GAGCACTGTT TCGGCTAGGG GGCCATCCCG GCTTACCAAA CCGATGCAAA CTCCGAATAC CGAAGAATGT TATCACGGGA GACACACGGC GGGTGCTAAC GTCCGTCGTG AAGAGGGAAA CAACCCAGAC CGCCAGCTAA GGTCCCAAAG TCATGGTTAA GTGGGAAACG ATGTGGGAAG GCACAGACAG CCAGGATGTT GGCTTAGAAG CAGCCATCAT TTAAAGAAAG CGTAATAGCT CACTGGTCGA GTCGGCCTGC GCGGAAGATG TAACGGGGCT AAACCATGCA CCGAAGCTGC GGCAGCGACG TTTAGGCGTT GTTGGGTAGG GGAGCGTTCT GTAAGCCGTT GAAGGTGACC TGTGAGGGTT GCTGGAGGTA TCAGAAGTGC GAATGCTGAC ATAAGTAACG ATAATGCGGG TGAAAAACCC GCACGCCGGA AGACCAAGGG TTCCTGTCCA ACGTTAATCG GGGCAGGGTG AGTCGACCCC TAAGGCGAGG CTGAAAAGCG TAGTCGATGG GAAACAGGTT AATATTCCTG TACTTGGTGT TACTGCGAAG GGGGGACGGA GAAGGCTAGG CTGGCCGGGC GACGGTTGTC CCGGTTTAAG CGTGTAGGGG GAGTGACCAG GTAAATCCGG TTGCTTATCA ACCCTGAGGC GTGATGACGA TGCACTACGG TGCAGAAGCA GTTGATGCCA TGCTTCCAGG AAAAGCCTCT AAGCATCAGG TAACATTAAA TCGTACCCCA AACCGACACA GGTGGTCAGG TAGAGAATAC TCAGGCGCTT GAGAGAACTC GGGTGAAGGA ACTAGGCAAA ATGGTGCCGT AACTTCGGGA GAAGGCACGC TGGCGTTAGG TGAAAGGACT AGCTCCTGGA GCTGAAGCCA GTCGCAGATA CCAGCTGGCT GCAACTGTTT AATAAAAACA CAGCACTGTG CAAACACGAA AGTGGACGTA TACGGTGTGA CGCCTGCCCG GTGCTGGAAG GTTAATTGAT GGGGTCAGCC GCAAGGCGAA GCTCTTGATC GAAGCCCCAG TAAACGGCGG CCGTAACTAT AACGGTCCTA AGGTAGCGAA ATTCCTTGTC GGGTAAGTTC CGACCTGCAC GAATGGCGTA ATGATGGCCA GGCTGTCTCC ACCCGAGACT CAGTGAAATT GAACTCGCTG TGAAGATGCA GTGTACCCGC GGCAAGACGG AAAGACCCCG TGAACCTTTA CTATAGCTTG ACACTGAACA TTGAGCCTTG ATGTGTAGGA TAGGTGGGAG GCCTTGAAGT GTGGACGCCA GTCTGCATGG AGCCAACCTT GAAATACCAC CCTTTAATGT TTGATGTTCT AACTCGGCCC CATGATCTGG GGTGAGGACA GTGTCTGGTG GGTAGTTTGA CTGGGGCGGT CTCCTCCCAA AGAGTAACGG AGGAGCACGA AGGTTAGCTA ATCACGGTCG GACATCGTGA GGTTAGTGCA AAGGCATAAG CTAGCTTGAC TGCGAGAGTG ACGGCTCGAG CAGGTACGAA AGTAGGTCTT AGTGATCCGG TGGTTCTGAA TGGAAGGGCC ATCGCTCAAC GGATAAAAGG TACTCCGGGG ATAACAGGCT GATACCGCCC AAGAGTTCAT ATCGACGGCG GTGTTTGGCA CCTCGATGTC GGCTCATCAC ATCCTGGGGC TGAAGTAGGT CCCAAGGGTA TGGCTGTTCG CCATTTAAAG TGGTACGCGA GCTGGGTTTA GAACGTCGTG AGACAGTTCG GTCCCTATCT GCCGTGGGCG TTGGAAGATT GAGAGGGGCT GCTCCTAGTA CGAGAGGACC GGAGTGGACG AATCACTGGT GTTCGGGTTG TCATGCCAAT GGCATTGCCC GGTAGCTAAA TTCGGAAGAG ATAACCGCTG AAAGCATCTA AGCGGGAAAC TTGCCTCGAG ATGAGTCTTC CCTGGGACTT AAAGTCCCCT GAAGGAACGT TAAAGACTAT GACGTTGATA GGCTGGGTGT GTAAGTGCAG CGATGTATTG AGCTAACCAG TACTAATGAT CCGTGAGGCT TAACCTT
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Protein sequence | |
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