Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4184 |
Symbol | gidB |
ID | 5384675 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4720291 |
End bp | 4720911 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640867212 |
Product | 16S rRNA methyltransferase GidB |
Protein accession | YP_001403126 |
Protein GI | 153947796 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0357] Predicted S-adenosylmethionine-dependent methyltransferase involved in bacterial cell division |
TIGRFAM ID | [TIGR00138] 16S rRNA methyltransferase GidB |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0000000000958004 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGTTAAAAA AATTAGACTC TCTGCTTACC GTTGCTGGTA TTACGTTACC CGATCAGCAA AAACATCAGT TGATTGGCTA TGTAGAGCTG CTAGACAAGT GGAATAAAGC TTATAACCTG ACATCTGTTC GTGATCCACA GCAAATGTTA GTGCGTCATA TCCTTGATAG CATTGTGGTT AATCCCCATC TGCAAGGCAG CCGATTTATT GATGTCGGAA CCGGGCCAGG TCTTCCTGGT ATCCCTTTGG CTATTGTGCG CCCTGATGCA CATTTTACTT TGTTGGATAG TCTGGGTAAG CGGGTTCGCT TTCTACGTCA GGTGCAACAC GAACTGGGGT TAAATAACAT TGAGCCGGTT CAGAGCAGAG TTGAGGCATT TACCTCAGAA CCGCCATTTG ATGGTGTGAT AAGCCGTGCA TTTGCATCCT TACAAGATAT GCTCTCGTGG TGTCACCACT TGCCAGCTAA GCCTGAAGGG CGTTTTTATG CGCTTAAAGG GGTTCGGCCT GATGATGAGT TAGCGGTTCT GCCCGAAGAT ATTGTTCTTG AGTCGGTGAT AAAACTGGAT GTTCCCGAAT TGGATGGAGA GCGGCATTTG ATTATTCTTA AGTCAAACTA A
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Protein sequence | MLKKLDSLLT VAGITLPDQQ KHQLIGYVEL LDKWNKAYNL TSVRDPQQML VRHILDSIVV NPHLQGSRFI DVGTGPGLPG IPLAIVRPDA HFTLLDSLGK RVRFLRQVQH ELGLNNIEPV QSRVEAFTSE PPFDGVISRA FASLQDMLSW CHHLPAKPEG RFYALKGVRP DDELAVLPED IVLESVIKLD VPELDGERHL IILKSN
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