| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4178 |
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| Symbol | atpA |
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| ID | 5387824 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4715436 |
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| End bp | 4716977 |
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| Gene Length | 1542 bp |
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| Protein Length | 513 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640867206 |
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| Product | F0F1 ATP synthase subunit alpha |
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| Protein accession | YP_001403120 |
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| Protein GI | 153947933 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0056] F0F1-type ATP synthase, alpha subunit |
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| TIGRFAM ID | [TIGR00962] proton translocating ATP synthase, F1 alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.000943089 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTGA ATTCCACCGA AATCAGCGAA CTGATCAAGC AGCGCATTGC TCAGTTCAAT
GTAGTGAGCG AAGCTCACAA TGAAGGTACT ATTGTTTCCG TTAGTGACGG GATCATTCGT
GTACACGGTC TGGCCGATGT TATGCAGGGT GAGATGATCG CACTGCCAGG CAACCGTTAC
GCAATCGCAC TGAACTTGGA GCGCGACTCC GTAGGTGCTG TAGTTATGGG TCCGTACGCC
GATCTTGCCG AAGGCATGAA GGTTAAATGT ACTGGCCGTA TCCTGGAAGT TCCTGTCGGT
CGTGGCCTGT TGGGGCGTGT CGTCAATACT CTGGGTGAAC CTATTGATGG TAAAGGTTCT
ATAGAAAACG ACGGCTTCTC AGCTGTTGAA GCTATCGCAC CTGGTGTTAT CGAACGTCAA
TCCGTTGATG AGCCTGTTCA GACGGGCTAT AAATCCGTCG ATGCCATGAT CCCAATTGGT
CGTGGTCAGC GTGAATTGAT CATCGGTGAC CGTCAGACAG GTAAAACTGC ACTGGCGATT
GATGCGATCA TCAACCAACG CGATTCCGGC ATTAAATGTG TGTATGTTGC TATCGGCCAG
AAAGCCTCTA CTGTTGCAAA CGTAGTGCGC AAGCTGGAAG AACATGACGC ATTAGCTAAC
ACCATTGTGG TTGTTGCTAC TGCATCAGAA TCTGCAGCAT TGCAGTATCT GGCACCTTAC
TCCGGTTGTG CCATGGGTGA ATATTTCCGT GATCGCGGTG AAGATGCGCT GATTATTTAT
GATGACCTGT CTAAACAGGC TGTTGCATAT CGTCAAATCT CCTTGCTGCT TCGTCGTCCA
CCAGGTCGTG AAGCCTATCC TGGCGACGTA TTCTACCTCC ACTCCCGTTT GTTGGAGCGT
GCTGCGCGTG TAAACGCTGA GTATGTTGAG GCCTTTACCA AGGGTGAAGT GAAAGGTAAA
ACAGGTTCTT TAACCGCATT ACCTATCATT GAAACTCAGG CAGGTGACGT TTCTGCGTTT
GTTCCGACCA ACGTAATATC GATTACAGAT GGTCAGATCT TCCTGGAATC CAGCCTGTTT
AACGCCGGTA TTCGTCCTGC CGTTAACCCA GGTATCTCCG TATCCCGTGT GGGTGGTGCA
GCGCAGACCA AGATCATGAA AAAACTGTCC GGTGGTATTC GTACCGCTCT GGCACAGTAT
CGTGAGCTTG CAGCGTTCTC CCAGTTCGCA TCCGATTTGG ATGATGCAAC ACGTAAACAG
CTGAGCCATG GTCAGAAAGT GACCGAGCTT CTGAAACAGA AACAATATGC GCCGATGTCG
GTTGCACAGC AGTCTCTGGT TCTGTTCGCA GCTGAACGTG GTTATCTGGG TGATGTCGAG
TTGGCGAAGG TGGGTAGCTT TGAAGCTGCA CTGTTGGCAT TTGCTGACCG TGAGCATGCT
GAGCTTCTGC AACAAATCAA CCAAACTGGC GCGTATAACG ATGAGATCGA GGCCAAGCTG
AAAGGCATCC TCGATACATT TAAGGCAACC CAGTCCTGGT AA
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| Protein sequence | MQLNSTEISE LIKQRIAQFN VVSEAHNEGT IVSVSDGIIR VHGLADVMQG EMIALPGNRY
AIALNLERDS VGAVVMGPYA DLAEGMKVKC TGRILEVPVG RGLLGRVVNT LGEPIDGKGS
IENDGFSAVE AIAPGVIERQ SVDEPVQTGY KSVDAMIPIG RGQRELIIGD RQTGKTALAI
DAIINQRDSG IKCVYVAIGQ KASTVANVVR KLEEHDALAN TIVVVATASE SAALQYLAPY
SGCAMGEYFR DRGEDALIIY DDLSKQAVAY RQISLLLRRP PGREAYPGDV FYLHSRLLER
AARVNAEYVE AFTKGEVKGK TGSLTALPII ETQAGDVSAF VPTNVISITD GQIFLESSLF
NAGIRPAVNP GISVSRVGGA AQTKIMKKLS GGIRTALAQY RELAAFSQFA SDLDDATRKQ
LSHGQKVTEL LKQKQYAPMS VAQQSLVLFA AERGYLGDVE LAKVGSFEAA LLAFADREHA
ELLQQINQTG AYNDEIEAKL KGILDTFKAT QSW
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