Gene YpsIP31758_4173 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_4173 
SymbolglmS 
ID5385873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4708508 
End bp4710337 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content47% 
IMG OID640867201 
Productglucosamine--fructose-6-phosphate aminotransferase 
Protein accessionYP_001403115 
Protein GI153947742 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains 
TIGRFAM ID[TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTGTGGAA TTGTTGGCGC AGTAGCGCAA CGTGATATCG CTGAGATTCT GATCGAAGGC 
TTACGTCGCC TTGAATACCG TGGCTATGAC TCCGCTGGTT TAGCGGTAGT TGATAGTGAA
GGTCACCTGA CTCGTTTACG TAGGGTGGGT AAGGTTCATG CTTTGTCTGA TGCTGCTGAA
AAGCAGGATT TACACGGTGG CACGGGCATA GCTCATACCC GCTGGGCTAC CCATGGGGAG
CCGTCAGAGG CTAATGCACA CCCTCATGTT TCTGACTATA TCTCCGTCGT GCATAACGGC
ATTATTGAGA ATCATGAACC GTTACGTGAA TTATTAATTA GCCGTGGCTA TCGTTTTAGC
TCTGAAACTG ACACCGAAGT TATTGCTCAC TTAGTACATT GGGAGCAGCA GCAAGGGGGG
GCTTTGCTGG AAGTTGTGAA ACGTGTGATT CCGCAATTAC GCGGTGCATA CGGTACTGTT
GTGATGGATA GCCGTGACCC AAGTCGTCTG ATTGCCGCTC GTTCAGGTAG CCCGCTGGTG
ATCGGGTGCG GTGTGGGTGA AAACTTTATT GCTTCTGACC AGCTTGCTTT ACTGCCAGTT
ACTCGCCGGT TTATCTTCTT GGAAGAAGGT GATGTGGTTG AAGTTACTCG CCGGAGCATC
TCTATCTTTG ATAAGCAGGG TAATGCTATT GAGCGCCCTG AAATCGAATC TCAGGTGCAA
TACGATGCGG GTGATAAAGG TATTTACCGC CATTACATGC AGAAAGAAAT TTATGAACAG
CCAATGGCGA TTAAGAATAC GCTGGAAGGC CGTTTAAGCC ACGGGATGAT TGATCTGTCA
GAACTTGGCC CAAAAGCTGA TGCCCTGTTG GCAGAGGTTC AACATATTCA AATCATTGCC
TGCGGTACGT CTTACAACTC AGGGATGGTT TCTCGTTATT GGTTTGAGTC TTTAGCGGGT
GTGCCATGTG ATGTCGAAAT TGCCTCTGAA TTTCGTTATC GCAAATCAGC TGTGCGTCCA
AATAGCCTGT TGATCACTTT GTCACAATCT GGCGAAACGG CTGATACTCT GGCAGCTCTG
CGTTTATCTA AAGAGTTGGG GTATTTAGGT TCACTGGCCA TTTGTAACGT TGCAGGATCT
TCTTTAGTTC GCGAATCAGA TTTAGCGCTG ATGACCAAAG CAGGTACTGA GATTGGTGTT
GCTTCAACAA AAGCCTTTAC CACTCAATTG ACTGTTTTGC TGATGCTGGT GGGGCGTATA
GGTAAGCTGA AAGGTGCTGA TGCCAGCCTG GAGCACGATA TTGTCCATGC GTTACAGGCA
TTGCCTGCAC GTATTGAGCA GATGTTATCT CTGGATAAAA CCATTGAAGC GTTGGCTGAA
GGTTTCTCTG ATAAGCATCA TGCACTGTTC CTTGGCCGTG GTGATCAATA CCCGATCGCA
ATGGAAGGGG CGCTGAAGCT GAAGGAGATC TCTTATATTC ACGCAGAGGC TTACGCTGCG
GGTGAATTGA AGCATGGCCC ATTGGCATTG ATTGATGCGG ATATGCCGGT CATTGTGGTG
GCACCGAACA ATGAATTATT GGAAAAACTC AAATCCAATA TTGAAGAAGT GCGTGCTCGT
GGTGGTTTGC TATACGTGTT TGCTGATCAA GATGCCGGGT TCACTGATAG CGAAGGTATG
AAAATAATTC AGCTGCCACA TGTCGAAGAA ATTATTGCGC CTATCTTCTA TACCGTACCG
CTACAGCTAC TGTCTTATCA TGTCGCGCTG ATTAAAGGCA CTGATGTGGA TCAGCCACGT
AACTTGGCAA AATCAGTAAC GGTTGAATAA
 
Protein sequence
MCGIVGAVAQ RDIAEILIEG LRRLEYRGYD SAGLAVVDSE GHLTRLRRVG KVHALSDAAE 
KQDLHGGTGI AHTRWATHGE PSEANAHPHV SDYISVVHNG IIENHEPLRE LLISRGYRFS
SETDTEVIAH LVHWEQQQGG ALLEVVKRVI PQLRGAYGTV VMDSRDPSRL IAARSGSPLV
IGCGVGENFI ASDQLALLPV TRRFIFLEEG DVVEVTRRSI SIFDKQGNAI ERPEIESQVQ
YDAGDKGIYR HYMQKEIYEQ PMAIKNTLEG RLSHGMIDLS ELGPKADALL AEVQHIQIIA
CGTSYNSGMV SRYWFESLAG VPCDVEIASE FRYRKSAVRP NSLLITLSQS GETADTLAAL
RLSKELGYLG SLAICNVAGS SLVRESDLAL MTKAGTEIGV ASTKAFTTQL TVLLMLVGRI
GKLKGADASL EHDIVHALQA LPARIEQMLS LDKTIEALAE GFSDKHHALF LGRGDQYPIA
MEGALKLKEI SYIHAEAYAA GELKHGPLAL IDADMPVIVV APNNELLEKL KSNIEEVRAR
GGLLYVFADQ DAGFTDSEGM KIIQLPHVEE IIAPIFYTVP LQLLSYHVAL IKGTDVDQPR
NLAKSVTVE