Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4173 |
Symbol | glmS |
ID | 5385873 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4708508 |
End bp | 4710337 |
Gene Length | 1830 bp |
Protein Length | 609 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640867201 |
Product | glucosamine--fructose-6-phosphate aminotransferase |
Protein accession | YP_001403115 |
Protein GI | 153947742 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0449] Glucosamine 6-phosphate synthetase, contains amidotransferase and phosphosugar isomerase domains |
TIGRFAM ID | [TIGR01135] glucosamine--fructose-6-phosphate aminotransferase (isomerizing) |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGTGGAA TTGTTGGCGC AGTAGCGCAA CGTGATATCG CTGAGATTCT GATCGAAGGC TTACGTCGCC TTGAATACCG TGGCTATGAC TCCGCTGGTT TAGCGGTAGT TGATAGTGAA GGTCACCTGA CTCGTTTACG TAGGGTGGGT AAGGTTCATG CTTTGTCTGA TGCTGCTGAA AAGCAGGATT TACACGGTGG CACGGGCATA GCTCATACCC GCTGGGCTAC CCATGGGGAG CCGTCAGAGG CTAATGCACA CCCTCATGTT TCTGACTATA TCTCCGTCGT GCATAACGGC ATTATTGAGA ATCATGAACC GTTACGTGAA TTATTAATTA GCCGTGGCTA TCGTTTTAGC TCTGAAACTG ACACCGAAGT TATTGCTCAC TTAGTACATT GGGAGCAGCA GCAAGGGGGG GCTTTGCTGG AAGTTGTGAA ACGTGTGATT CCGCAATTAC GCGGTGCATA CGGTACTGTT GTGATGGATA GCCGTGACCC AAGTCGTCTG ATTGCCGCTC GTTCAGGTAG CCCGCTGGTG ATCGGGTGCG GTGTGGGTGA AAACTTTATT GCTTCTGACC AGCTTGCTTT ACTGCCAGTT ACTCGCCGGT TTATCTTCTT GGAAGAAGGT GATGTGGTTG AAGTTACTCG CCGGAGCATC TCTATCTTTG ATAAGCAGGG TAATGCTATT GAGCGCCCTG AAATCGAATC TCAGGTGCAA TACGATGCGG GTGATAAAGG TATTTACCGC CATTACATGC AGAAAGAAAT TTATGAACAG CCAATGGCGA TTAAGAATAC GCTGGAAGGC CGTTTAAGCC ACGGGATGAT TGATCTGTCA GAACTTGGCC CAAAAGCTGA TGCCCTGTTG GCAGAGGTTC AACATATTCA AATCATTGCC TGCGGTACGT CTTACAACTC AGGGATGGTT TCTCGTTATT GGTTTGAGTC TTTAGCGGGT GTGCCATGTG ATGTCGAAAT TGCCTCTGAA TTTCGTTATC GCAAATCAGC TGTGCGTCCA AATAGCCTGT TGATCACTTT GTCACAATCT GGCGAAACGG CTGATACTCT GGCAGCTCTG CGTTTATCTA AAGAGTTGGG GTATTTAGGT TCACTGGCCA TTTGTAACGT TGCAGGATCT TCTTTAGTTC GCGAATCAGA TTTAGCGCTG ATGACCAAAG CAGGTACTGA GATTGGTGTT GCTTCAACAA AAGCCTTTAC CACTCAATTG ACTGTTTTGC TGATGCTGGT GGGGCGTATA GGTAAGCTGA AAGGTGCTGA TGCCAGCCTG GAGCACGATA TTGTCCATGC GTTACAGGCA TTGCCTGCAC GTATTGAGCA GATGTTATCT CTGGATAAAA CCATTGAAGC GTTGGCTGAA GGTTTCTCTG ATAAGCATCA TGCACTGTTC CTTGGCCGTG GTGATCAATA CCCGATCGCA ATGGAAGGGG CGCTGAAGCT GAAGGAGATC TCTTATATTC ACGCAGAGGC TTACGCTGCG GGTGAATTGA AGCATGGCCC ATTGGCATTG ATTGATGCGG ATATGCCGGT CATTGTGGTG GCACCGAACA ATGAATTATT GGAAAAACTC AAATCCAATA TTGAAGAAGT GCGTGCTCGT GGTGGTTTGC TATACGTGTT TGCTGATCAA GATGCCGGGT TCACTGATAG CGAAGGTATG AAAATAATTC AGCTGCCACA TGTCGAAGAA ATTATTGCGC CTATCTTCTA TACCGTACCG CTACAGCTAC TGTCTTATCA TGTCGCGCTG ATTAAAGGCA CTGATGTGGA TCAGCCACGT AACTTGGCAA AATCAGTAAC GGTTGAATAA
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Protein sequence | MCGIVGAVAQ RDIAEILIEG LRRLEYRGYD SAGLAVVDSE GHLTRLRRVG KVHALSDAAE KQDLHGGTGI AHTRWATHGE PSEANAHPHV SDYISVVHNG IIENHEPLRE LLISRGYRFS SETDTEVIAH LVHWEQQQGG ALLEVVKRVI PQLRGAYGTV VMDSRDPSRL IAARSGSPLV IGCGVGENFI ASDQLALLPV TRRFIFLEEG DVVEVTRRSI SIFDKQGNAI ERPEIESQVQ YDAGDKGIYR HYMQKEIYEQ PMAIKNTLEG RLSHGMIDLS ELGPKADALL AEVQHIQIIA CGTSYNSGMV SRYWFESLAG VPCDVEIASE FRYRKSAVRP NSLLITLSQS GETADTLAAL RLSKELGYLG SLAICNVAGS SLVRESDLAL MTKAGTEIGV ASTKAFTTQL TVLLMLVGRI GKLKGADASL EHDIVHALQA LPARIEQMLS LDKTIEALAE GFSDKHHALF LGRGDQYPIA MEGALKLKEI SYIHAEAYAA GELKHGPLAL IDADMPVIVV APNNELLEKL KSNIEEVRAR GGLLYVFADQ DAGFTDSEGM KIIQLPHVEE IIAPIFYTVP LQLLSYHVAL IKGTDVDQPR NLAKSVTVE
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