Gene YpsIP31758_4151 details

Gene Information

• Locus tag: YpsIP31758_4151
• Symbol: recF
• ID: 5385492
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis IP 31758
• Kingdom: Bacteria
• Replicon accession: NC_009708
• Strand: -
• Start bp: 4686528
• End bp: 4687613
• Gene Length: 1086 bp
• Protein Length: 361 aa
• Translation table: 11
• GC content: 53%
• IMG OID: 640867179
• Product: recombination protein F
• Protein accession: YP_001403093
• Protein GI: 153947001
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1195] Recombinational DNA repair ATPase (RecF pathway)
• TIGRFAM ID: [TIGR00611] recF protein

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 0.000332755
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCTCTAA CGCGTTTACT CATTAAAGAT TTTCGCAATA TCGAATCGGC AGACTTGGCG 
CTGGCGGCGG GCTTTAATTT TTTAGTCGGC CCCAATGGCA GTGGCAAAAC CAGTGTACTC 
GAGGCGGTTT ATACCCTTGG TCATGGTAGG GCTTTTCGTA GTTTGCAAGC AGGCAGAGTG 
ATACGTCACG AATGTGCTGA GTTTGTGTTG CATGGCCGGG TTGACGCCAA TGAACGTGAG 
GCGTCAGTGG GTCTGAGCAA AAGCCGACAG GGTGATACCA AAGTGCGCAT TGATGGCACC 
GATGGGCATA AAGTGGCTGA ATTGGCGCAA ATGTTGCCAA TGCAGTTAAT CACTCCTGAA 
GGTTTTACGT TATTAAATGG CGGGCCAAAA TTCCGGCGCG CTTTTTTAGA CTGGGGTTGC 
TTTCATAATG AACCCGGTTT TTTTACGGCC TGGAGCAACC TAAAAAGGTT ACTCAAGCAG 
CGCAACGCCG CGCTGCGCCA GGTTAGTCGC TATACGCAAA TCCGGGCTTG GGATCAGGAA 
ATCATCCCTC TGGCTGAGCG TATCAGCGAA TGGCGAGCGG CATACAGTGA CGCGATTGCG 
GCGGATATTT CAGCCACATG CGCTCTGTTC CTGCCAGAGT TCGCCCTGAG TTTCTCTTTC 
CAGCGCGGCT GGGATAAAGA GAGTGACTAT GGCGAGTTGT TGGAGCGCCA GTTTGAGCGT 
GACAGAGCGC TAACGTATAC CGCCGTTGGG CCACATAAAG CGGATTTCCG CATTCGGGCC 
GATGGTACGC CGGTAGAAGA TTTGCTATCG CGTGGTCAGC TTAAGTTGCT GATGTGCGCA 
CTGCGGTTAG CGCAGGGTGA GTTTCTCACC CGACAGAGCG GGCGGCGTTG CCTGTATCTG 
CTTGACGATT TTGCTTCCGA ATTGGACACC GGCCGCCGTC GATTGCTGGC CGAGCGTTTG 
AAAGCTACCC AGGCACAAGT TTTTGTCAGC GCCGTGAGCG CTGAGCAAGT TGCCGATATG 
GTAGGTGAAA AGGGCAAGAT GTTCCGTGTG GAACATGGCA AAATAGAGGT TCAACCACAG 
GATTAA 

 

Protein sequence

MALTRLLIKD FRNIESADLA LAAGFNFLVG PNGSGKTSVL EAVYTLGHGR AFRSLQAGRV 
IRHECAEFVL HGRVDANERE ASVGLSKSRQ GDTKVRIDGT DGHKVAELAQ MLPMQLITPE 
GFTLLNGGPK FRRAFLDWGC FHNEPGFFTA WSNLKRLLKQ RNAALRQVSR YTQIRAWDQE 
IIPLAERISE WRAAYSDAIA ADISATCALF LPEFALSFSF QRGWDKESDY GELLERQFER 
DRALTYTAVG PHKADFRIRA DGTPVEDLLS RGQLKLLMCA LRLAQGEFLT RQSGRRCLYL 
LDDFASELDT GRRRLLAERL KATQAQVFVS AVSAEQVADM VGEKGKMFRV EHGKIEVQPQ 
D