| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4147 |
|---|
| Symbol | |
|---|
| ID | 5384767 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4681378 |
|---|
| End bp | 4682331 |
|---|
| Gene Length | 954 bp |
|---|
| Protein Length | 317 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 640867175 |
|---|
| Product | ornithine cyclodeaminase |
|---|
| Protein accession | YP_001403089 |
|---|
| Protein GI | 153948516 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG2423] Predicted ornithine cyclodeaminase, mu-crystallin homolog |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 47 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAATTC TGAATAAACA AAAAATTCTC GACAAGTTCG ATGCGGATCG CATCACATTA
TTGCTCAAAG AGGGCTTTAT TGCTTTTAGT CAGCAACGGG TCCAGATGCC GCCAGTACAG
CATTTACTGT TTGATCAGGC CAATGGTGAT TGCTGTATTA AAAGTGGTTA TTTACAGGGC
GATGACCAGT TTGTCGTGAA GGTCTCCGGT GGGTTTTATG ATAACCCTGC TCAAGGATTA
GCCAGTAATC AAGGGTTGAT GATGGCATTT TCGGCAAAAA CCGGTGAACC ACAAGCGATC
TTACTGGATG AAGGCTGGCT AACGGCGCTG CGCACAGCAC TGGCCGGGCG AATTGTCGCC
GAGCTTTGCG CGCCACAGCA CATCAGCGCC CTTGGTATCG TGGGGACAGG AATACAGGCG
CGGCTGCATC TGATGTACCT GAAAAATGTG ATGACTTGCC GCCAGCTATG GGTCTGGGGC
CGCAGTGAAA CGGCATTAGA GGAGTATCGC CAATATGCGC AAGCAGAGGG CTTTGCAGTC
AACACCACGT TGAATGCCGC AGAGCTGGCC CATCACAGCC AATTTATTGT CACCACCACG
CCAAGCCGGG AGCCTATTTT ACAGGCTGAA GATATCCAGC CGGGGACACA TATTACGGCG
GTTGGGGCAG ATAGCGCGGG TAAGCACGAG CTCTCCGCCG AGTTAGTCGC GAGAGCCGAT
AAAATTCTGG TGGATTCAAT CGCGCAATGC ACCGATTTTG GCGAAGTTTC GTTAGCGTTT
AAGCAAGGGC TGTTGGCTCA TCACAACTTA ACTGAGATCG GTTTAGCTTT AGCGCAAGGC
ATCCCTTTTA GAGAGAATGA CCAACAGATT ACCTTGGCGG ATTTAACCGG GTTGGGGATT
CAGGATGTGC AGATAGTGAA GGGGATTTTG GGAGATAAAA AGGGGGTGTT GTGA
|
|---|
| Protein sequence | MLILNKQKIL DKFDADRITL LLKEGFIAFS QQRVQMPPVQ HLLFDQANGD CCIKSGYLQG
DDQFVVKVSG GFYDNPAQGL ASNQGLMMAF SAKTGEPQAI LLDEGWLTAL RTALAGRIVA
ELCAPQHISA LGIVGTGIQA RLHLMYLKNV MTCRQLWVWG RSETALEEYR QYAQAEGFAV
NTTLNAAELA HHSQFIVTTT PSREPILQAE DIQPGTHITA VGADSAGKHE LSAELVARAD
KILVDSIAQC TDFGEVSLAF KQGLLAHHNL TEIGLALAQG IPFRENDQQI TLADLTGLGI
QDVQIVKGIL GDKKGVL
|
|---|
| |