| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4140 |
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| Symbol | avtA |
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| ID | 5387951 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 4674286 |
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| End bp | 4675551 |
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| Gene Length | 1266 bp |
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| Protein Length | 421 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640867169 |
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| Product | valine--pyruvate transaminase |
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| Protein accession | YP_001403083 |
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| Protein GI | 153950052 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG3977] Alanine-alpha-ketoisovalerate (or valine-pyruvate) aminotransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGTTTT CACTTTTCGG CGACAAATTT ACCCGTTATG CGGGTATTAC CAGATTGATG
GATGACCTCA ACGATGGCCT GAGAACACCG GGTTCTATCA TGCTTGGTGG CGGAAATCCG
GCACATATCC CTGAGATGGA TACCTACTTC CAACAACTGT GTCAGGAGAT GCTAACAGAA
GGCAAGTTAA CCGAGGCATT GTGTAATTAC GACGGGCCGC AAGGTAAAGA CTTACTGCTA
AACGCACTGG CAAAAATGCT GCGCGATGAG CTGGGTTGGC AGATAGAACC ACAGAATATT
GCACTGACAA ATGGCAGTCA GAGTGCATTT TTCTACTTAT TTAATTTGTT CGCTGGCCGT
TATGCCGATG GTAGCCGCCA TCGGGTGCTG TTCCCACTGG CGCCAGAGTA TCTGGGCTAT
GCGGATGCAG GTCTGGATGA AGATTTATTT GTCTCCGCCA AACCGAATAT TGAGCTGTTA
CCCGAGGGGC AGTTTAAATA TCACGTGGAT TTTGAACACC TCAATATTAC TGATGATATT
GGCTTGATAT GCGTATCAAG GCCTACAAAC CCCACCGGTA ATGTCATTAC TGACGAAGAG
TTAATCCGCC TTGATGCGAT CGCGCAGCAA CGTAATATTC CGTTATTGAT TGATAATGCT
TATGGCGTCC CCTTCCCTGG TATTATTTTT ACCGACGCCA CACCGCTGTG GAACCCGAAC
ATCATCTTGT GCATGAGCCT GTCAAAGCTG GGCCTACCAG GTTCACGATG CGGGATTGTC
ATTGCCGATG AAAAAGTGAT TTCGGCCATC ACCAATATGA ACGGTATTAT CAGCCTGTCA
CCGGGCGGTA TGGGGCCCGC GATCGCCGCC GAAATGATTG AGCGTGGTGA TTTATTGCGC
TTATCCAACG AGGTGATCCG GCCGTTTTAC TTTGAACGTG TACAGCAGAC CATCGCCATC
TTGCGCAAAT ACCTGCCCGC TGAACGCTGC CTGATCCACA AACCCGAAGG CGCTATTTTC
CTCTGGCTGT GGTTTAAAGA TTTGCCAATC AGCACCGAAC TGCTCTATCA GCGCCTGAAA
AAACGTGGCG TTCTGATGGT ACCGGGCCAT TACTTCTTCC CCGGTCTGGG CTATGACTGG
CCACATACTC ACCAATGTAT GCGAATGAAT TATGTGCCGG CTCCGGAAAT GATTGAAAAA
GGTGTCGCGA TCTTGGCGGA AGAGATTGAA CGGGCGTTTC AGGAAGCGAA ACAACTTACT
GATTAA
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| Protein sequence | MKFSLFGDKF TRYAGITRLM DDLNDGLRTP GSIMLGGGNP AHIPEMDTYF QQLCQEMLTE
GKLTEALCNY DGPQGKDLLL NALAKMLRDE LGWQIEPQNI ALTNGSQSAF FYLFNLFAGR
YADGSRHRVL FPLAPEYLGY ADAGLDEDLF VSAKPNIELL PEGQFKYHVD FEHLNITDDI
GLICVSRPTN PTGNVITDEE LIRLDAIAQQ RNIPLLIDNA YGVPFPGIIF TDATPLWNPN
IILCMSLSKL GLPGSRCGIV IADEKVISAI TNMNGIISLS PGGMGPAIAA EMIERGDLLR
LSNEVIRPFY FERVQQTIAI LRKYLPAERC LIHKPEGAIF LWLWFKDLPI STELLYQRLK
KRGVLMVPGH YFFPGLGYDW PHTHQCMRMN YVPAPEMIEK GVAILAEEIE RAFQEAKQLT
D
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