Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4130 |
Symbol | glyS |
ID | 5385430 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4662982 |
End bp | 4665051 |
Gene Length | 2070 bp |
Protein Length | 689 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640867159 |
Product | glycyl-tRNA synthetase subunit beta |
Protein accession | YP_001403073 |
Protein GI | 153949017 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0751] Glycyl-tRNA synthetase, beta subunit |
TIGRFAM ID | [TIGR00211] glycyl-tRNA synthetase, tetrameric type, beta subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 40 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACTCAAC AGACTTTCCT GGTGGAAATC GGCACGGAAG AGCTGCCGCC GAAGGCTCTT CGTTCTCTGG CCGAATCTTT TGCCGCTAAT TTTACGGCTG AACTGGATAA CGCTAATTTG TCTCACGGTG AGGTGAGTTG GTACGCCGCG CCGCGCCGTC TGGCAGTAAA AGTGGCCAAT TTAAGTGCGG CTCAGGCTGA TCGTGAAGTC GAAAAGCGCG GCCCGGCCAT TGCGCAAGCG TTTGATGCTG AAGGTAAACC TAGCAAAGCC GCTGAAGGTT GGGCGCGTGG TTGTGGTATT ACAGTCGATC AGGCGGAGCG TCTGGTGACG GATAAAGGCG AGTGGCTGCT GTACCGTGCC CATGTCAAAG GGCAACCCGC CCAATTATTG CTGGCAGGCA TGGTTAATAC CGCGCTGAGT AAGTTGCCAA TTCCAAAGCT GATGCGTTGG GGTGATAAAG AAACTCAATT CGTCCGTCCG GTGCATACCG TGACCCTGCT CTTGGGGACT GAAGTTATTC CTGGCACCGT GCTGGGTATC AATTCAGATC GGGTGATCCG TGGCCATCGC TTTATGGGTG AAGCGGAATT CACGATCGAC AGTGCTGACC AATATCCACA GATTCTGCTG GAGCGTGGCA AGGTCATTGC TGATTATGAA TTGCGTAAAT CAATCATTAA GCGTGATGCA GAACAGGCAG CGCAACAGAT TGGCGGTGTT GCTGATCTGA GTGAAAGCCT GCTAGAGGAA GTGGCGTCAT TGGTGGAGTG GCCGGTGGTG CTCACCGCCA AGTTTGAAGA GAAATTCCTG GCTGTCCCTG CGGAAGCGCT GGTGTACACC ATGAAGGGTG ATCAGAAGTA TTTCCCGGTT TACGATACTG CCGGCCACTT GATGCCACAC TTCATTTTTG TCGCCAACAT TGAGTCTAAA GACCCTCAAC AAATCATTTC TGGCAATGAG AAGGTGGTTC GCCCTCGTTT GGCTGATGCT GAGTTCTTCT TTAAGACCGA CCGCAAAAAA CGGTTGGAAG ATAATTTACC GCGTCTGGAA ACCGTGCTGT TCCAACAGCA ACTGGGTACC CTGCGTGATA AAACAGATCG TATTCAGGCG TTGGCGGGTT GGGTTGCCGC ACAAATTGGC GCTGATGTTA ATCACGCCAC CCGTGCGGGT CTGTTGTCCA AGTGTGACCT GATGACCAAC ATGGTATTCG AATTCACCGA TACCCAAGGC GTGATGGGGA TGCACTACGC CCGCCACGAT GGTGAGGCTG AAGACGTTGC CGTTGCATTG AATGAACAAT ATCAGCCACG CTTTGCCGGT GATGATTTGC CGTCTAACCC GGTCGCTTGT GCGCTGGCCA TTGCCGATAA GATGGACACA CTGGCGGGTA TCTTCGGTAT CGGTCAACAT CCGAAAGGCG ATAAAGATCC GTTTGCTCTG CGCCGTGCGG CGTTGGGTGT ACTGCGCATT ATCGTCGAAA AGAATTTGTC ACTGGATCTG CAAACACTGA CGGAAGAGGC GGTGCGCCTG TACGGCAGTA AGCTGACCAA TGCGAAAGTG GTCGATGACG TGATTGAATT CATGCTGGGC CGTTTCCGTG CCTGGTATCA GGATGAAGGT CATAGCGTCG ATACCATTCA GGCGGTATTG GCTCGTCGTC CGACCAAACC GGCTGATTTT GATGCGCGAG TGAAAGCGGT GACCTATTTC CGCACACTGG ATGCTGCTGC CGCATTGGCT GCTGCCAACA AACGTGTATC AAACATTCTG GCAAAATCCA CGGATACCCT GAATGACCAT GTTCATGCTT CGATCTTAAA AGAACCGGCA GAGCTAAAAC TGGCGACACA TTTGGTGGTA TTACGCGATC AACTGGAGCC GGTTTTCGCG GCTGGTCAGT ATAAAGAGGC GCTGGTTGAA TTAGCTGCGT TGCGGGAAAC TGTCGATGAG TTCTTCGAGA GCGTGATGGT GATGGCTGAA GACGATGCTG TACGGGTTAA CCGTCTGACA TTGCTGAGCA AACTCCGCGA ACTGTTCTTG CAGGTTGCTG ATATTTCGCT GTTGCAATAA
|
Protein sequence | MTQQTFLVEI GTEELPPKAL RSLAESFAAN FTAELDNANL SHGEVSWYAA PRRLAVKVAN LSAAQADREV EKRGPAIAQA FDAEGKPSKA AEGWARGCGI TVDQAERLVT DKGEWLLYRA HVKGQPAQLL LAGMVNTALS KLPIPKLMRW GDKETQFVRP VHTVTLLLGT EVIPGTVLGI NSDRVIRGHR FMGEAEFTID SADQYPQILL ERGKVIADYE LRKSIIKRDA EQAAQQIGGV ADLSESLLEE VASLVEWPVV LTAKFEEKFL AVPAEALVYT MKGDQKYFPV YDTAGHLMPH FIFVANIESK DPQQIISGNE KVVRPRLADA EFFFKTDRKK RLEDNLPRLE TVLFQQQLGT LRDKTDRIQA LAGWVAAQIG ADVNHATRAG LLSKCDLMTN MVFEFTDTQG VMGMHYARHD GEAEDVAVAL NEQYQPRFAG DDLPSNPVAC ALAIADKMDT LAGIFGIGQH PKGDKDPFAL RRAALGVLRI IVEKNLSLDL QTLTEEAVRL YGSKLTNAKV VDDVIEFMLG RFRAWYQDEG HSVDTIQAVL ARRPTKPADF DARVKAVTYF RTLDAAAALA AANKRVSNIL AKSTDTLNDH VHASILKEPA ELKLATHLVV LRDQLEPVFA AGQYKEALVE LAALRETVDE FFESVMVMAE DDAVRVNRLT LLSKLRELFL QVADISLLQ
|
| |