Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4107 |
Symbol | |
ID | 5385937 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4634430 |
End bp | 4634987 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640867137 |
Product | fimbrial protein |
Protein accession | YP_001403051 |
Protein GI | 153947487 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3539] P pilus assembly protein, pilin FimA |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCTAACG TTAAGAAAAG TACTTTGATT ATTGCTTTAG CAACTTCATC TGTTATTTAT CAGGCTTTCG CTGCTGATGC AGGGAATGGG CGTATTAAGT TCACAGGAAC GGTTATTAAT GCACCGTGCT CAATTGCATT AGATTCTACT GATATTAATG TAGATCTAGG GCAGGTCGCG AATAGGGTTC TGGAGACGGG TAACAAATAC TCTCAGAGCG TACGGTATAA CATTAATCTG CAAGATTGTA GCCTGACGGC TCAAGGGAGT GGGGGGGCCA CTTATCCTGC ACTGTCTAAA GTCAATGTCA CCTTCAGCGG TATTGCTGAT GCGGCGGCTC CAGCCCTGCT GGCTAACACC GGTAGCGCGA AAGGCGTGGG TGTTCGCCTT ATTGGCACTG ATGACGCGCT ACTCAAAGTG GGTGATACGA GTCCTGATAT TAATCTGACA TCTGGTCCGA ATCAGATTGT ATTTTCTGCT CGTATTGAAG CCACCAGTGC GCCAGTAACT ACCGGTACTG TTGTCTCTCA GGCAACCTAT GCTCTGAATT ATAAATAA
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Protein sequence | MSNVKKSTLI IALATSSVIY QAFAADAGNG RIKFTGTVIN APCSIALDST DINVDLGQVA NRVLETGNKY SQSVRYNINL QDCSLTAQGS GGATYPALSK VNVTFSGIAD AAAPALLANT GSAKGVGVRL IGTDDALLKV GDTSPDINLT SGPNQIVFSA RIEATSAPVT TGTVVSQATY ALNYK
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