| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4106 |
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| Symbol | |
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| ID | 5387340 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4631862 |
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| End bp | 4634354 |
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| Gene Length | 2493 bp |
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| Protein Length | 830 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640867136 |
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| Product | fimbrial usher protein |
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| Protein accession | YP_001403050 |
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| Protein GI | 153949755 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3188] P pilus assembly protein, porin PapC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCATATA ATTCTAAAAG AAAAAAAACC ATCTTCCTAA TGGTGAAAGT ATTAACAATA
ATTTTAGTAT GGTTATTTTT GCCTGAATCG ACTGCAGTAG TAAAATTCAA TACCAATATT
ATCGATGCTA AAGACCGTAG TAATATCGAT CTCTCTCGTT TTGAGGTTGA TGATTACACC
CCACCGGGGA ATTATCTCCT TGATATTCTT ATTGATGATA GGCTGTTACC TGAACGTTAT
TTAGTGACTT ATCTCGCTGT TGATGAAGGG AAATCAACGA AGCTCTGTTT GACGCCTGAC
TTAGTTAATC TATTTGGTTT ATCTACGGAA GTACGTGAGT CGATGACATT ATGGAATAAC
GACAAGTGTG TTGCTATTGA TGAAAAAAAA GAGATAAAAA TTCAGTACGA TAAAGAGAAG
CAATCCTTAA TTATTTCTAT TCCCCAAGCT TGGCTGGCTT ATAACGATCC CAATTGGGTG
CCGCCTTCAC AATGGGGAAA CGGTGTTGCT GGTACTTTAT TGGATTACAA TTTGTTTGGT
TATCATTACT CACCGAATAT GGGCGGCAGT ACCACAAATT TCAGCAGCTA CGGCACTACC
GGGGCTAATA TGGGACCATG GCGTATTCGT GCAGATTACC AATATATCAA TACAGAAACG
GCGGGCGAGC ACTACCGTAA TTTTGATTGG TCGCAAGTGT ATGCTTTTCG AGCCATCCCC
TCGATAGGGG CTAAATTTGT CGGTGGCCAG ACTTATCTCA ACTCCAGTAT TTTTGATTCA
TTCCGTTTTC TGGGCACTTC ACTTTCCAGT GATGAGCGCA TGTTGCCACC GACGTTACGC
GGCTATGCAC CACAGGTAAT GGGCATTGCT CACACCAACG CCCGCGTGGT ATTGAGCCAG
AATGGGCGGG TGCTTTATCA GACTAACGTT GCACCAGGCC CCTTTGTTAT TCAAGACATT
AGCGAAGCCG TACAAGGGAA TATTGATGTC CGCGTGGAAG AGGAAGATGG CCGGGTCACC
GTGTTTCAAG TCAACGCCGC GAGCGTGCCA TTTTTAACCC GTAAAGGTGC CGTGCGCTAT
AAAGCTGCGT TGGGTCGCCC GATGCTGGGT AATTCAGCCA GTAATCCGAC ATTCTTTAGT
GGCGAATTCT CGTGGGGCGC ATTTAACCAT GTTTCATTAT ACGGTGGGCT GATGACGACT
TCGCAGGATT ACACCTCGGC TGCGTTGGGC ATCGGGCAAA ATTTATATGA CTTCGGCGCA
CTGTCTATTG ATATCACCCA TTCCCGTGCG CAGTTACCAA ATGAAGAACA GCAGAACGGG
GAAAGCTATC GCGTTAATTA TTCCAAACGT TTTGAGCAGA CTGACAGCCA GATTAGCTTT
GCCGGATACC GTTTCTCGAA GAAGAATTTT ATGAGTATGA GCCAGTATTT GGATTGGCTA
AACGGCAATA CTGCTCTGCA ATATGACAAG CAGGCTTATA CCGTGGCAGC TAACCAGTAT
CTGGCCTGGC CGGATATCAC GATGTATTTA TCGGTGACAC GTAGAACCTA TTGGAATGCG
GCCTCCAGTA ACAACTACAG TCTATCCATG AGCAAGATTT TTGATATCGG TACTTTTAAG
GGTATTTCGG CGACGATATC CGCTAATAAG GTGAATAATC AGTATGCCAA TGAGAATCAA
ATGTTCTTCT CACTCAGCGT ACCGATCGGC ATAGGCCAGC AGGCCAGCTA TGATGCACAG
CGAGGCCGCA ATACCGGCTA CACGCAAAAT ATCTCCTATT TCAACAACCA GAATCCGAAA
AATATTTGGC GTATCAGCGC GGGTGGCGGT AACCCAGAAC TGCAAAAAGG TAATGGTGTG
TTCCGTGGTG GCTATCAACA TAGCTCGCCT TATGGTGAAT TTGGTCTTGA TGGCAGTCAT
AAAAATAATG AGTACAACTC AATCAATACC AACTGGTATG GCTCAATTAC GGCAACCGCT
TATGGGGTTG CTGCCCACCA GAATAAAGCG GGCAATGAAC CAAGAATAAT GGTTGATACC
GGGGATGTCG CAGGGGTGTC GCTGAATAAT AACTCGGCAG TGACGAACCG TTTTGGTGTG
GCGGTGGTCA GTGGCGCAAC CAGCTACCAA CAGTCTGATA TTCGGGTGGA TGTGCAGAAT
CTGCCGGATG ATATTGAGGT CTACAACACC GTTATCCAAA AAACGCTGAC CGAAGGGGCA
ATTGGTTACC GTGAGATAAG GGCGGTAAAA GGTCGGCAAA TGATGGCGAT TATTCGCCTG
AAAGATGGCA GTTCCCCCCC CTTGGGGGCA TCCGTTATCA CGGACAAAAC GGGCGCTGAA
GTTGGAATTG TGGGAGACGA TGGCCTGACG TATTTGGCGG GATTACAAGA CACTGAGAGG
CTGACTGTTC AATGGGGGAA AAAACAGTGC ACGCTCATAT TGCCAAAAGA TAAAGGAATG
AACTCAGGAA AGGTACTACT GCCCTGCCAG TAA
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| Protein sequence | MPYNSKRKKT IFLMVKVLTI ILVWLFLPES TAVVKFNTNI IDAKDRSNID LSRFEVDDYT
PPGNYLLDIL IDDRLLPERY LVTYLAVDEG KSTKLCLTPD LVNLFGLSTE VRESMTLWNN
DKCVAIDEKK EIKIQYDKEK QSLIISIPQA WLAYNDPNWV PPSQWGNGVA GTLLDYNLFG
YHYSPNMGGS TTNFSSYGTT GANMGPWRIR ADYQYINTET AGEHYRNFDW SQVYAFRAIP
SIGAKFVGGQ TYLNSSIFDS FRFLGTSLSS DERMLPPTLR GYAPQVMGIA HTNARVVLSQ
NGRVLYQTNV APGPFVIQDI SEAVQGNIDV RVEEEDGRVT VFQVNAASVP FLTRKGAVRY
KAALGRPMLG NSASNPTFFS GEFSWGAFNH VSLYGGLMTT SQDYTSAALG IGQNLYDFGA
LSIDITHSRA QLPNEEQQNG ESYRVNYSKR FEQTDSQISF AGYRFSKKNF MSMSQYLDWL
NGNTALQYDK QAYTVAANQY LAWPDITMYL SVTRRTYWNA ASSNNYSLSM SKIFDIGTFK
GISATISANK VNNQYANENQ MFFSLSVPIG IGQQASYDAQ RGRNTGYTQN ISYFNNQNPK
NIWRISAGGG NPELQKGNGV FRGGYQHSSP YGEFGLDGSH KNNEYNSINT NWYGSITATA
YGVAAHQNKA GNEPRIMVDT GDVAGVSLNN NSAVTNRFGV AVVSGATSYQ QSDIRVDVQN
LPDDIEVYNT VIQKTLTEGA IGYREIRAVK GRQMMAIIRL KDGSSPPLGA SVITDKTGAE
VGIVGDDGLT YLAGLQDTER LTVQWGKKQC TLILPKDKGM NSGKVLLPCQ
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