Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4103 |
Symbol | xylB |
ID | 5388076 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4628443 |
End bp | 4629897 |
Gene Length | 1455 bp |
Protein Length | 484 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640867133 |
Product | xylulokinase |
Protein accession | YP_001403047 |
Protein GI | 153950703 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1070] Sugar (pentulose and hexulose) kinases |
TIGRFAM ID | [TIGR01312] D-xylulose kinase |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTATGTTG GTATCGACCT GGGCACCTCC GGCGTTAAAG CTATTTTACT GGCCGAAAAC GGGCGAGTAA TTGCCAGCCA AAACGCAGCA CTGGTGGTTT CTCGCCCACA TCCTTTATGG TCTGAACAAA ACCCCGCTGA TTGGTGGCAA GCAACCGATC AGGTCATGCA AGCACTGGCC GCAGAACACG ATATGCAGCA AGTGAAAGCG CTCGGGCTGA CCGGGCAAAT GCACGGGGCA ACCTTGCTAG ATAAACAACA TCAGGTGCTG CGCCCCGCCA TTTTATGGAA TGACGGCCGC AGTTTTTCCC AGTGCCAAAC ATTGGAGCAA GCGGTACCGG CATCACGCCA GATAACCGGT AACTTGATGA TGCCGGGCTT TACCGCGCCC AAATTGCAAT GGCTGGCAGA ACATGAACCA GACATGTTTC AATGTATCGA TAAAGTATTA TTACCAAAAG ATTATCTGCG CTTCCTGATG AGCGGTGATT TTGCCACTGA TATGTCTGAT GCTGCCGGTA CGATGTGGTT GAATATCGCA CAACGTGATT GGAGTGATGA AATGTTGGCG GCCTGTGGTT TAGGCCGTCA GCACATGCCA GCCTTGTTTG AAGGTAACCA AATAACCGGC CATGTCAGTG CAGATATTGC CAAACGTTGG GGTATCAACA GGATACCGAT TGTCGCCGGC GGTGGCGATA ATGCAGCCGG GGCGGTGGGG GTTGGGCTGT ATCAGCCCGG ACAGGCGATG TTGTCACTGG GGACATCCGG CGTCTATTTT GCAGTCAGCG AGGGTTTTCT CAGCAATCCA GCCAGTGCGG TTCACAGTTT TTGCCACGCA CTGCCTAATA CTTGGCATTT GATGTCAGTC ATGCTCAGTG CCGCCTCGTG TTTGGATTGG GCCTGCCAAC TCACTGGGGC CGAGAGCGTT CCCGCGTTGA TTGCTGAGGT AGAAAAAACC CCAATGGCTG CAACGCCAGT GTGGTTCCTA CCCTATCTTT CCGGCGAACG CACCCCTCAT AACAACCCTA AGGCTAAAGG GGCGTTTTGG GGCTTCACCC ATGAACATAG GCGGCCAGAT TTAGCCCGCG CAGTATTGGA AGGTGTCGGG TTCGCACTTG CAGATGGAAT GGATGCTCTC CATGCCAGTG GGCTACAACC GAAATCAGTC ACATTAATTG GCGGCGGCGC TCGCAGTGCC TACTGGCGAC AAATGCTGGC TGATATCAGT GGCCAAACGC TGGAATATCG CACCGGCGGT GATGTTGGCC CCGCGCTGGG CGCTGCCCGG TTGGCTCAAA TCGCCATGAA CCCAGATGTA TCACTGGCTG ATTTATTGCC TGCACTGGCG TTGGAACAAA CGCATTTACC GGATCCACAA AAGCATCACT ATTACACCGA TCGCCGGGTA ACCTTTAAAA AACTTTATCA ACAATTGCTG CCATTGTGTG AGTAG
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Protein sequence | MYVGIDLGTS GVKAILLAEN GRVIASQNAA LVVSRPHPLW SEQNPADWWQ ATDQVMQALA AEHDMQQVKA LGLTGQMHGA TLLDKQHQVL RPAILWNDGR SFSQCQTLEQ AVPASRQITG NLMMPGFTAP KLQWLAEHEP DMFQCIDKVL LPKDYLRFLM SGDFATDMSD AAGTMWLNIA QRDWSDEMLA ACGLGRQHMP ALFEGNQITG HVSADIAKRW GINRIPIVAG GGDNAAGAVG VGLYQPGQAM LSLGTSGVYF AVSEGFLSNP ASAVHSFCHA LPNTWHLMSV MLSAASCLDW ACQLTGAESV PALIAEVEKT PMAATPVWFL PYLSGERTPH NNPKAKGAFW GFTHEHRRPD LARAVLEGVG FALADGMDAL HASGLQPKSV TLIGGGARSA YWRQMLADIS GQTLEYRTGG DVGPALGAAR LAQIAMNPDV SLADLLPALA LEQTHLPDPQ KHHYYTDRRV TFKKLYQQLL PLCE
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