| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4098 |
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| Symbol | xylR |
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| ID | 5386837 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4621348 |
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| End bp | 4622541 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 640867128 |
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| Product | xylose operon regulatory protein |
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| Protein accession | YP_001403042 |
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| Protein GI | 153949200 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators
[COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 53 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAA AACGCTACCG GATCACCTTG TTGTTTAACG CTAACAAAGT GTATGACCGG
CAGGTGGTAG AAGGCGTGGG CGAGTATTTA CAAGCCTCGC AATGTAATTG GGATATTTTT
ATTGAAGAGG ATTTTCGCTG CCGAATCGAC AATATTAAGG ATTGGCTGGG CGATGGTGTG
ATTGCGGATT TTGATGATCG GCAGATAGAG CAGCTACTGG CAAATGTGAA CGTACCGATT
GTCGGCGTCG GCGGCTCTTA TCATCAGTCG GAAGATTATC CATCGGTAGA TTATATCGCG
ACTGACAATA AGGCATTGGT CAATGCGGCA TTTATGCATT TGAAAGAGAA GGGATTAAAC
CGTTTTGCTT TCTATGGGTT GCCCGCCAGT TGCGGTATGC GCTGGGCACA GGAGCGGGAA
TATGCGTTTC GCCAATTAGT GTCTGCCGAA CAATATCAAG GCGTGGTTTA TCAAGGGATG
GCAACGGCTC CGGATAATTG GCAATACGCA CAAAACCGGC TGGCCGATTG GGTACAAACC
TTACCGCATC AGACGGGGAT TATCGCGGTG ACCGATGCAC GGGCACGTCA TTTATTGCAA
GTGTGTGAGC ATCTGGATAT TGCCGTACCA GAGAAACTGA GTGTGATCGG TATTGATAAT
GAAGAGTTAA CCCGTTATTT ATCGCGGGTG GCGCTCTCTT CGGTGGTTCA GGGAACCCGA
CAAATGGGGT ATCGGGCGGC CAAGCTACTC CATCAACGTC TCAAGCTACG GCAAAAACAG
CAAACAGACC CGCCCTTACA GCGTATTTTG GTCCCACCAG TGAAAGTCAT GGCCCGCCGC
TCTACGGACT TCCGCTCGTT ACGTGACCCG GCGGTTATTC AGGCGATGCA TTATATTCGC
CACCACGCTT GCAAGGGGAT CAAAGTTGAA CAGGTATTGG ATGCGGTAGG GATGTCGCGC
TCAAATCTGG AAAAGCGTTT TAAAGATGAG GTCGGCCAAA CCATTCATGG CGTGATTCAT
GAAGAAAAAC TCGATAGGGC GCGCAATTTA CTGGCGGCGA CATCACTCCC TATTAATGAG
ATATCACAGA TGTGCGGTTA TCCATCGCTA CAATACTTTT ATTCAGTGTT CAAAAAAGGT
TATTCCATCA CACCGAAGGA GCACCGTGAC AAATACGGCG AAGTGAGTTA TTGA
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| Protein sequence | MFEKRYRITL LFNANKVYDR QVVEGVGEYL QASQCNWDIF IEEDFRCRID NIKDWLGDGV
IADFDDRQIE QLLANVNVPI VGVGGSYHQS EDYPSVDYIA TDNKALVNAA FMHLKEKGLN
RFAFYGLPAS CGMRWAQERE YAFRQLVSAE QYQGVVYQGM ATAPDNWQYA QNRLADWVQT
LPHQTGIIAV TDARARHLLQ VCEHLDIAVP EKLSVIGIDN EELTRYLSRV ALSSVVQGTR
QMGYRAAKLL HQRLKLRQKQ QTDPPLQRIL VPPVKVMARR STDFRSLRDP AVIQAMHYIR
HHACKGIKVE QVLDAVGMSR SNLEKRFKDE VGQTIHGVIH EEKLDRARNL LAATSLPINE
ISQMCGYPSL QYFYSVFKKG YSITPKEHRD KYGEVSY
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