| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4090 |
|---|
| Symbol | |
|---|
| ID | 5384911 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4613822 |
|---|
| End bp | 4615066 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 640867119 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001403034 |
|---|
| Protein GI | 153947496 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0439] Biotin carboxylase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 35 |
|---|
| Plasmid unclonability p-value | 0.572464 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAAA TCATTGTTGT AGACGGATTT TCTTCCGGTA AATTTGTGGC TATGACGCTC
TATAAAATGG GGTGTGAACT TATTCATATC GCATCGCGCT GTGATTTGGA TAGTTATTAC
TATGCAGGCT TCGATGAAAC AATCTATCGT CAGCAACGCA TCAATAAGCA CATTGATGAC
ACTATCGAAT TTGCACGCCA ACTTGGTGCC GACGCGGTTA TTGCAGGGGC AGAGAGTGGT
GTCCTGCTGG CTGATCGGCT TAATCATGAA CTAAGTTTAT GCTATAGAAA TGCCTTTGTC
ACCTCGTCTG CCCGTCGTAA TAAATATGAG ATGATCAATA CATTGGCTAA CGCAGGATTA
TCTGCTGCCA GACAGATTGA TACCGCTGAC TGGGAGGATG CCAGCGCATG GCTGGACGTT
CACGCAACAT GGCCTGTCGT CTTAAAACCA CTTGAGAGCG CAGGCTCAGA TGGTGTCTTT
ATTTGCCAAG ATAAGCAGAG TGCGTATCAC GCTTTTTTGG CTATTCTCGG TACCGCGAAT
AAACTCAGTC TGGTCAATGA AAGTGTATTA TTGCAGGAGT TTCTTGATGG CACCGAATAC
GTTGTCAATT TCGTTTCGTT AGATGGTGAA CCGTTGGTCA CTGAGATCGT TCGCTACCAT
AAAAGAAGGC TCCCATCAGG CAGCGTCATT TACGATATTG ACGAACTTCT CGATTGTACA
AGCCCGGAGT ATCAGCCTCT GGTGGATTAC ACCAAACAAG CCGCTTTGGT TCTGGGGATC
AAAAATGGCC CTAGCCATGC GGAGGTGATG ATGACCTCCG GTGGCCCGGT TCTGGTTGAG
ATTGCCGCCA GAACTGATGG GATTTTACAC CCTGACGTCG CCGCCGTAAC AACCGGCTTT
GGCCAACTGG TAGCCTTCGC CCAATCGCTT GCTGATCCTG ACAGATTCAG GCAAACACTC
AAAAAAGAGA GTTATCGGCT AAATGCTCAT TCTTTCAACG TGTGCTTGAT CAATCAGGCC
GCTGGAGTGT TCTCAGCCAA ACATTTTGAA CGTGAATTAC AACGCCTGCC CTCATATAAA
AAGTCAGTTT ATTACGTCAA TGAGGGGGAC AATATTAAAG TAACAAAAAA TGTATTCAGC
CAACCAGGAA CAGTTTATTT GGTCCATAAA AGCAAAGAAC AGCTCTGGCA AGATTATACC
TCTATCAGGA AAATGGAATC TGATGGATTC TATCTACTGC CATAA
|
|---|
| Protein sequence | MKKIIVVDGF SSGKFVAMTL YKMGCELIHI ASRCDLDSYY YAGFDETIYR QQRINKHIDD
TIEFARQLGA DAVIAGAESG VLLADRLNHE LSLCYRNAFV TSSARRNKYE MINTLANAGL
SAARQIDTAD WEDASAWLDV HATWPVVLKP LESAGSDGVF ICQDKQSAYH AFLAILGTAN
KLSLVNESVL LQEFLDGTEY VVNFVSLDGE PLVTEIVRYH KRRLPSGSVI YDIDELLDCT
SPEYQPLVDY TKQAALVLGI KNGPSHAEVM MTSGGPVLVE IAARTDGILH PDVAAVTTGF
GQLVAFAQSL ADPDRFRQTL KKESYRLNAH SFNVCLINQA AGVFSAKHFE RELQRLPSYK
KSVYYVNEGD NIKVTKNVFS QPGTVYLVHK SKEQLWQDYT SIRKMESDGF YLLP
|
|---|
| |