| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4087 |
|---|
| Symbol | |
|---|
| ID | 5384958 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4611301 |
|---|
| End bp | 4612245 |
|---|
| Gene Length | 945 bp |
|---|
| Protein Length | 314 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640867116 |
|---|
| Product | pyridoxal-phosphate dependent protein |
|---|
| Protein accession | YP_001403031 |
|---|
| Protein GI | 153948609 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0031] Cysteine synthase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 42 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAACTTA AGGATATTGG TAACACCGAG CTTATTGAGC TAAAAAACTT ATCAATAAAT
AATAATTCTC TTTTTTCTAA GTGCGAATTC AACAATCCTA CAGGTAGCCA TAAAGACCGA
ACATTTCTGC ATATCCTCAA TATCTTGGAA GAAGAAAATA AAATAATTCC CGGAATGACA
TTGATAGACT GCTCAACAGG GAATGGAGGT GCAGCACTGG CTTGGATTGG TCAAAAAAAA
GGCTATAAAA TTAAAATATT TATGCCTGAA GGCATGACTG AAGAACGCAA AGAACAGATC
TATTCATTTG GTGGAGAAAT TATCGAAACC CCCAAAGAAA ACTTCTTAAA GGGTGCTGTA
AAAGCAGCAA CTGAATACTC AAATCACCAA AAAAACATAT TCTTTCTCAA TCAATCTGAC
ACCACCTTAA ATAAAGATGC GTGGCATAGT TGTGGTGAAG AAATTGTCAG AAAAATGAAA
GAGATAAATA AAAAACCTGA TTACTTTATT TGTTCAATCG GAACGGGAGG TACATTTTCG
GGTATTGCGG AAATTTTGAA GAAAGCCTAC CCACGAATCC ATACGGTGGG TATTGAAGTT
GATCAATCGG CCCCGATCTA TTCACAGCGA CATGGTCTTA ACTTTCATCA TAAACATCAT
AATCTTATGG GGCTAGGTGC TGGTGTTATT TCAGTGAATA CCCTTTTAGA TTTGATCGAT
GAGGTAAGGG TTGTTAATGG CAAAGCGGCT TGGGAAAGGA TGAAAAGCTT CATCGAAAAG
GAGCGCTTAG GAATTGGGCC AACCTGTGGA GCTAACTTGT TGATTACGGA AGATATAATG
CAAGAAGTTA ACGGGAAAGT GATTGTCACT CTATTCTTTG ATAGTGCATG GAAATATAAA
AGTTGCTGGG ATGGAGTTTA CCCTGGATAT AAGGAAACCC AATGA
|
|---|
| Protein sequence | MELKDIGNTE LIELKNLSIN NNSLFSKCEF NNPTGSHKDR TFLHILNILE EENKIIPGMT
LIDCSTGNGG AALAWIGQKK GYKIKIFMPE GMTEERKEQI YSFGGEIIET PKENFLKGAV
KAATEYSNHQ KNIFFLNQSD TTLNKDAWHS CGEEIVRKMK EINKKPDYFI CSIGTGGTFS
GIAEILKKAY PRIHTVGIEV DQSAPIYSQR HGLNFHHKHH NLMGLGAGVI SVNTLLDLID
EVRVVNGKAA WERMKSFIEK ERLGIGPTCG ANLLITEDIM QEVNGKVIVT LFFDSAWKYK
SCWDGVYPGY KETQ
|
|---|
| |