Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4079 |
Symbol | uhpB |
ID | 5387693 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4599236 |
End bp | 4600765 |
Gene Length | 1530 bp |
Protein Length | 509 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 640867108 |
Product | sensory histidine kinase UhpB |
Protein accession | YP_001403023 |
Protein GI | 153948078 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG3851] Signal transduction histidine kinase, glucose-6-phosphate specific |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 51 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATACAGC GCTTGGTGAT GCTGCTGGCG TTATTCTTTA TTTATTTTAC TGCGGCTTTC TGCCTGTGGG CTATAGGGAC ACAATTAGCT GATCGGGCTT TACAGTCGCT GCTGTTGTTC CCATTTGGTC TGCGTATGGG GATTTTATTA CAAAGTCCAC GTGCTTACTG GCCTGGCATT TTACTGGGTG ATGTCCTGTT GTGGTGGCTA TTAGCCGATC AATTCGATGA TTTATATCAG TTGTGGGTCG CCTTGCCGCT GTTGTTATTG ACCACCTTAT TGGCCCTTTT TGCCTCCCCG TGGTTATTGC GCCATCAGCA AAATGAGAGC GAATGGCAAT GGCCGTTAAT GCAGGGGGGC GTTATCACGG TTGCCGCGCT AATACAGGCG TTGGGGTGGC AGATAGCCAG TGGGCAGGGC GCAATGGCGC TCTTATTAGG GTTGGTTGGT GGCTTTACCA TCGCGCCTAC CTGCCTGCTG CTGTGGCACT ATCTGGCACG TCAAATCTGG TTACCGCTTG AACCTGGGTT GATACATAAA CCGGTTAACC TGCGGTTGCG GCATATCCTG TGGTATCTAC TGCTATTTGC CATCAGTATC TGGTTACAGT ACCAAGTGAC TGAAACAGAT TTACGCTTAT TTGTACCGTT CTGTTTGGCG ATCCCCATTG TGTTTATGGC ATATCGCTAT GGCTGGCAGG GGGCGTTGGC GGCCACGTTA CTCAATGGTG TAGTGCTGTT GATTAATACA CCTGAACCCC TTGAATCTCA TCGTGGCTTG CTACTTTCAC TGTTGGCACA AAGTCTAACA GGTCTGCTCT TGGGATCCGG CATTCAACGA CAGCGGGAGT TGAACGATCA ACTACAAATA AAATTGAACG AAAACCGTGA GTTGGCTAAA GCATTAGTGG TTTCTGAGGA GCATACACGG CACGATGTCG CGCGTGAGTT ACATGATGAA GTGGGGCAAA CCGTAACGGT TATCCGTACC CAAGCCAGTA TTATTAAACG TCTGGCGACC CAGCAACCGG TACTGACCAG TGCAGAGATG ATAGAAACTG CGGCATTGCG GGTTTATGAT GGTGTCCATG ACGTATTGGC TAAATTATGG CCAGCGGCAT TAAATAATTT GCCGCTGTCG GCCGCCATCG CTGCATTGAT GCGCGAACTC ATTCCGCAAG ACCAGTCGGT GCTCGGTGTG CTTAACTGGC AGGTCAATGA CCATCCGATG GATGAGACGT TGAAAATTAC GCTTTACCGT ATATGTCAGG AGGGGGTGAC CAATGCTTAT CGGCATGGTG CCGCCAGCCG AATTGAAATT AATGCACGGC AGGATAACCA ACAGATATAT CTAACGATTA GCGATAATGG TAAAGGTATC GATTTAGCCT CAATTACTCC AGGCTATGGG CTACGGGGTA TTCAGTCACG GGTCAGTGCG TTTGGGGGCA ATGTGAGCCT AAGCGTTGAT AACGGTACTT GCTTAAATGT GACCCTGCCC ACAGTTTCTT TGTCTACAAA AGGAAACTAA
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Protein sequence | MIQRLVMLLA LFFIYFTAAF CLWAIGTQLA DRALQSLLLF PFGLRMGILL QSPRAYWPGI LLGDVLLWWL LADQFDDLYQ LWVALPLLLL TTLLALFASP WLLRHQQNES EWQWPLMQGG VITVAALIQA LGWQIASGQG AMALLLGLVG GFTIAPTCLL LWHYLARQIW LPLEPGLIHK PVNLRLRHIL WYLLLFAISI WLQYQVTETD LRLFVPFCLA IPIVFMAYRY GWQGALAATL LNGVVLLINT PEPLESHRGL LLSLLAQSLT GLLLGSGIQR QRELNDQLQI KLNENRELAK ALVVSEEHTR HDVARELHDE VGQTVTVIRT QASIIKRLAT QQPVLTSAEM IETAALRVYD GVHDVLAKLW PAALNNLPLS AAIAALMREL IPQDQSVLGV LNWQVNDHPM DETLKITLYR ICQEGVTNAY RHGAASRIEI NARQDNQQIY LTISDNGKGI DLASITPGYG LRGIQSRVSA FGGNVSLSVD NGTCLNVTLP TVSLSTKGN
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