Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4078 |
Symbol | uhpC |
ID | 5385154 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4597810 |
End bp | 4599141 |
Gene Length | 1332 bp |
Protein Length | 443 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 640867107 |
Product | regulatory protein UhpC |
Protein accession | YP_001403022 |
Protein GI | 153949496 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | [TIGR00881] phosphoglycerate transporter family protein |
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Plasmid Coverage information |
Num covering plasmid clones | 42 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTGGTTTT TCCTCAAAAG TCGCGATAAC GTACCGCCAG TAACGGATCA AACACAAATT GATTCATCCT ATAAGTATTG GCGTATCCAA TTAATGTGGA CGATGTATAT CGGCTACGCT GCGTTTTATT TCACTCGTAA AAGTTTCAAT TTTATTATGC CTGCTATGCT CACGGACCTA GGGCTGAGCA TGTCTGATGT CGGGATTTTA GGCACGCTGT TTTACATCAC TTACGGCTGC TCTAAATTTG TCTCTGGGAT GATCAGCGAT CGCTCAAATC CGCGTTATTT TATGGGGATC GGGTTGGTCA TGACGGGGAT TATTAATATC CTGTTTGGCA TGAGCTCATC ACTTTTGGTC CTTGGCGCCT TGTGGATCCT CAATGCGTTC TTCCAAGGTT GGGGCTGGCC ACCATGTTCT AAAATATTGA CCAGTTGGTA CTCGCGTTCT GAACGTGGTG GCTGGTGGGC TATTTGGAAC ACCTCACATA ACTTTGGCGG GGCGCTGATC CCCTTGCTCG TCGGGGTGAT TACTCTGCAC TTTAGCTGGC GCTACGGGAT GATCATCCCC GGTATTATAG GTGTGGTGAT TGGTTTGCTG ATGTGTTGGC GTCTGCGAGA TAAGCCAAGC ACCATGGGCC TACCAAGTGT GGGTAAATGG CGCAATGATG CGATGGAGCT GATCCAGGAA TCCGAAGGCC AGGGGCTGTC TAATAAAGAA ATTGTGAAGC GTTATGTCTT AACCAATAAA TATATTTGGT TGTTAGCCGT TTCCTATGTG CTGGTTTATA TCGTTCGAAC CGCGATTAAT GACTGGGGTA ACCTCTATCT GACCCAAGAG AAAGGCTATT CGTTGCTGAC CGCTAACTCT GCAATTTCAT TATTTGAAGT GGGTGGATTT ATTGGTTCAT TGGTCGCAGG TTGGGGTTCT GATAAGTGGT TCCGTGGCAA TCGTGGGCCG ATGAACCTGA TTTTTGCTAT TGGTATCTTC CTCTCAGTTG CATCACTGTG GACGTTGCCA AGCATCAGTT TTGTTTTACA GGCAGGCTGC TTCTTTGCGA TTGGTTTCTT TATTTTCGGG CCACAAATGC TGATTGGTAT GGCTGCTGCT GAGTGCTCTC ATAAGGATGC CGCTGGCGCT GCAACCGGCT TTGTTGGGCT GTTTGCCTAT TTAGGGGCGG CTTTATCGGG TTACCCTATC GCTCGCATCA TGGAAATCTG GCATTGGAAT GGTTTCTTTG TGGTTATCTC TGTAGCGGCA TGTTTATCTG CTTTCTTCTT ATTGCCATTC CTGCGAGCGC AATCGCCGCA GTTAAAGCAA GCGACAACCT GA
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Protein sequence | MWFFLKSRDN VPPVTDQTQI DSSYKYWRIQ LMWTMYIGYA AFYFTRKSFN FIMPAMLTDL GLSMSDVGIL GTLFYITYGC SKFVSGMISD RSNPRYFMGI GLVMTGIINI LFGMSSSLLV LGALWILNAF FQGWGWPPCS KILTSWYSRS ERGGWWAIWN TSHNFGGALI PLLVGVITLH FSWRYGMIIP GIIGVVIGLL MCWRLRDKPS TMGLPSVGKW RNDAMELIQE SEGQGLSNKE IVKRYVLTNK YIWLLAVSYV LVYIVRTAIN DWGNLYLTQE KGYSLLTANS AISLFEVGGF IGSLVAGWGS DKWFRGNRGP MNLIFAIGIF LSVASLWTLP SISFVLQAGC FFAIGFFIFG PQMLIGMAAA ECSHKDAAGA ATGFVGLFAY LGAALSGYPI ARIMEIWHWN GFFVVISVAA CLSAFFLLPF LRAQSPQLKQ ATT
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