| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4071 |
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| Symbol | dppF |
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| ID | 5386185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4587484 |
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| End bp | 4588560 |
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| Gene Length | 1077 bp |
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| Protein Length | 358 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640867099 |
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| Product | dipeptide transporter ATP-binding subunit |
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| Protein accession | YP_001403015 |
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| Protein GI | 153949844 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 55 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATTCGA ACACTGAAGC GGCGCATAAA GTAAACATGA TGGGTGAAAC CGAAATAAAG
GGAGAAAGTT TGCCAGCAGA GACGGGTAAA AAGCCGTTAT TACAGGCGAT CGATCTGAAA
AAATACTACC CGGTGAAAAA GGGTTTCTTT ACACCAGAAC GTTTGGTTAA AGCACTGGAT
GGCGTTTCGT TCACATTGGA GCGGGGCAAA ACATTGGCGG TAGTGGGTGA ATCAGGTTGT
GGTAAATCCA CTCTGGGCCG CTTACTGACG ATGATAGAGA TCCCTACCGG CGGCGAACTA
TACTATCAAG GGCAGGATCT GCTCAAGCCC GATGAAAGTG CGGAAAAACT GCGACGCCAG
AAGATTCAGA TTGTCTTCCA GAACCCCTAC GGTTCGCTGA ATCCACGTAA GAAGGTGGGG
CAGATTTTGG AAGAGCCATT GCAGATCAAT ACCCAGCTCA ATCGCAAGGA GCGCCGCGAA
AAAACCTTGG CAATGATGGC GAAAGTGGGC CTGAAAACTG AACATTATGA TCGCTATCCT
CATATGTTTT CCGGTGGTCA GCGTCAACGG ATCGCCATTG CCCGTGGATT GATGTTAAAC
CCTGATGTGG TGATTGCCGA TGAGCCGGTA TCTGCGCTGG ATGTCTCCGT GCGGGCGCAG
GTACTGAACC TGATGATGGA TTTACAGCAG GAATTGGGGC TGTCATATGT GTTTATTTCC
CATGACCTGT CGGTGGTTGA ACATATTGCT GACGACGTGA TGGTGATGTA TTTGGGGCGC
TGCGTTGAAA AAGGCAGCAA AGAGGCTATT TTTAACAACC CCCGCCATCC TTATACGCAA
GCATTGCTAT CAGCGACACC GCGTCTGAAC CCAGATATGC GTCGTGAGCG TATTAAATTG
ACTGGAGAAC TACCCAGCCC AATGAATCCA CCGCCAGGTT GTGCATTCAA TGCCCGCTGT
CGTAGAGCAT TTGGCACCTG TAGCCAGTTG CAGCCGCAGC TTAAGCAGTA TGGTGACCAG
ATGGTGGCGT GTTTTGCCGT TGATCAGGAT GAAGCAGAGA AGGCCGTTTC TGTTTGA
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| Protein sequence | MNSNTEAAHK VNMMGETEIK GESLPAETGK KPLLQAIDLK KYYPVKKGFF TPERLVKALD
GVSFTLERGK TLAVVGESGC GKSTLGRLLT MIEIPTGGEL YYQGQDLLKP DESAEKLRRQ
KIQIVFQNPY GSLNPRKKVG QILEEPLQIN TQLNRKERRE KTLAMMAKVG LKTEHYDRYP
HMFSGGQRQR IAIARGLMLN PDVVIADEPV SALDVSVRAQ VLNLMMDLQQ ELGLSYVFIS
HDLSVVEHIA DDVMVMYLGR CVEKGSKEAI FNNPRHPYTQ ALLSATPRLN PDMRRERIKL
TGELPSPMNP PPGCAFNARC RRAFGTCSQL QPQLKQYGDQ MVACFAVDQD EAEKAVSV
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