| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4068 |
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| Symbol | kdgM1 |
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| ID | 5387878 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4582575 |
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| End bp | 4583279 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 640867096 |
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| Product | oligogalacturonate-specific porin protein KdgM |
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| Protein accession | YP_001403012 |
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| Protein GI | 153950826 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR03304] outer membrane insertion C-terminal signal |
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Plasmid Coverage information |
| Num covering plasmid clones | 58 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATATTA AATTATTGTC TCTGGCAGTG GCATCACTCA TTAGTACCAG CGCAGTGGCA
GTCACTATTG ACTATCGTCA TGAAATGCAA GATCAAAGTG GTAACACTCA CAAAGATAGG
TTATTAATGT CCCACCGCTT TGCTAATGGC TTTGGATTAT CTTTGGAAGG CAAGTGGAAA
GGCGCTCAGG ATAAGGATAA ACCCTTCAAT GAAACCGTCA GTAATGGCAC TGAAGTTGTT
GCCAGCTATG TGTATAAAAT TAATAACACA TTCTCTATTG AGCCGGGATT CTCATTAGAT
TCAAACTCTA CGTCTAACAA TTATCGCCCT TATCTGCGTG GCAAGGCAGT TATCGTTGAT
GATCTCTCCG TTTCATTGCG TTATCGCCCT TATTATAAAC GTACCAGTGC GAATATTAAT
ACGCCAAAAG ACACCTCTGA AAATGGCTAT AACCTGACGA GTGTCATTAG TTATAAAATT
GCTAAAGATT ATCAATTAGA TTATGAAATC GATTACAAAC AGGCAAATAA AGCCGGTGTT
GTGTTAGCTG ATAAAGAAAA CTACGATTGG AGCCACGATC TTAAATTAAC GTACAAGTGG
GATAAGAATT GGTCTCCTTA TATGGCACTC GGTAATGTTT CTGGTAGCAA AAATACCGAT
GAGCGCCAAA CACGTTATCG CGTAGGGGTA AAATATAGCT TCTAA
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| Protein sequence | MNIKLLSLAV ASLISTSAVA VTIDYRHEMQ DQSGNTHKDR LLMSHRFANG FGLSLEGKWK
GAQDKDKPFN ETVSNGTEVV ASYVYKINNT FSIEPGFSLD SNSTSNNYRP YLRGKAVIVD
DLSVSLRYRP YYKRTSANIN TPKDTSENGY NLTSVISYKI AKDYQLDYEI DYKQANKAGV
VLADKENYDW SHDLKLTYKW DKNWSPYMAL GNVSGSKNTD ERQTRYRVGV KYSF
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