| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4064 |
|---|
| Symbol | dctA |
|---|
| ID | 5386661 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 4578246 |
|---|
| End bp | 4579535 |
|---|
| Gene Length | 1290 bp |
|---|
| Protein Length | 429 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 640867092 |
|---|
| Product | C4-dicarboxylate transporter DctA |
|---|
| Protein accession | YP_001403008 |
|---|
| Protein GI | 153948613 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1301] Na+/H+-dicarboxylate symporters |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTCT CTATTTTTAA AACGCTTTAT TTTCAAGTGC TAACGGCGAT AACTATTGGT
GTGTTGCTTG GCCATTTCTA CCCGGAAATC GGCGCTCAGA TGAAACCACT GGGTGATGGA
TTTGTTAAAT TAATTAAAAT GATTATCGCG CCCGTCATTT TTTGTACCGT TGTTACTGGT
ATCGCGGGCA TGGAGAGCAT GAAGGCCGTT GGCCGTACTG GTGCGATTGC ACTGCTCTAT
TTTGAAATTG TCAGTACTCT GGCGCTGCTG ATTGGTTTAG TGGTGGTTAA CGTGGCGCAA
CCCGGTGTTG GGATGAACAT CGATCCTGCG ACACTGGATG CTAAAGCGGT TGCACTTTAT
GCTGAGCAAG CCTCACAACA GGGGATTATT CCATTCTTGC TGGATATTAT TCCCGGTAGC
GTAGTTGGCG CATTTGCCAG CGGCAACATT CTGCAGGTCT TACTGTTTGC GGTCTTGTTT
GGTTTTGCTT TACACCGTTT GGGTGAAAAG GGGCAGTTGA TTTTCAATGT TATTGAAAGC
TTCTCCCGTG TTATTTTTGG TGTCATCAAT ATGATCATGC GCTTGGCACC GCTCGGGGCT
TTCGGTGCGA TGGCCTTTAC TATCGGTAAA TATGGTGTAG GAAGTCTGGT GCAATTGGGG
CAATTGATCC TCTGCTTCTA TTTGACCTGT ATTCTGTTTG TCGTTTTGGT ACTTGGCACG
ATTGCGAAAT TCAATGGTTT TAATATCTTC AAATTTATCC GTTATATCAA AGAAGAGCTG
TTGATCGTGT TAGGCACCTC CTCTTCTGAG TCAGTGCTCC CTCGCATGTT GGATAAAATG
GAGAACGCCG GGTGTAAAAA ATCGGTAGTG GGTCTGGTTA TCCCAACGGG CTACTCATTT
AACCTGGATG GCACCTCTAT TTACCTGACG ATGGCCGCGG TATTTATCGC TCAGGCAACT
AACACCCATA TGGATATTAT GCATCAGGTG ACATTGCTGG TGGTGCTGCT GCTCTCCTCA
AAAGGTGCGG CAGGTGTCAC AGGCAGTGGC TTTATCGTGT TGGCCGCCAC CATTTCTGCG
GTTGGACATT TACCTTTGGC TGGGCTAGCA TTGATTCTAG GGATTGACCG CTTTATGTCC
GAGGCTCGCG CCCTGACTAA TCTGGTAGGT AACGGTGTTG CCACCATTGT GGTCGCTAAA
TGGTGTAAGC AACTGGACAA TGACCAACTG CAAGCGGTGC TATCCAATAA AGTGCTGCCT
AATGTAAAAA ACAGTGTTTC TGTGTCCTGA
|
|---|
| Protein sequence | MKVSIFKTLY FQVLTAITIG VLLGHFYPEI GAQMKPLGDG FVKLIKMIIA PVIFCTVVTG
IAGMESMKAV GRTGAIALLY FEIVSTLALL IGLVVVNVAQ PGVGMNIDPA TLDAKAVALY
AEQASQQGII PFLLDIIPGS VVGAFASGNI LQVLLFAVLF GFALHRLGEK GQLIFNVIES
FSRVIFGVIN MIMRLAPLGA FGAMAFTIGK YGVGSLVQLG QLILCFYLTC ILFVVLVLGT
IAKFNGFNIF KFIRYIKEEL LIVLGTSSSE SVLPRMLDKM ENAGCKKSVV GLVIPTGYSF
NLDGTSIYLT MAAVFIAQAT NTHMDIMHQV TLLVVLLLSS KGAAGVTGSG FIVLAATISA
VGHLPLAGLA LILGIDRFMS EARALTNLVG NGVATIVVAK WCKQLDNDQL QAVLSNKVLP
NVKNSVSVS
|
|---|
| |