Gene YpsIP31758_4054 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_4054 
Symbol 
ID5387327 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4564549 
End bp4565418 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content35% 
IMG OID640867082 
Producthypothetical protein 
Protein accessionYP_001402998 
Protein GI153950581 
COG category 
COG ID 
TIGRFAM ID[TIGR03034] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones49 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGAAA CAAACATGAC GGAAAAAAAG GCACCACCCA AAACGCTACC CTTACAGTTC 
CCATTGTGCA TATTTAAAAC ACACAATCGT ATGGATGATT ACGGTGCTGC GGATATGAAG
AACGGTGATT TGACTGAAGC CGAATTAAAG GGAAAATTTA ATCTGAGAGG GGTATCCGTT
ACGCTAGATC CTTACACGGG TGAAAAAACA CCCACCAGTT TTGCTATGGA TCATTTCAAT
AAAAAACCGA AAGAAAAAGT CAATAAAGCA GAGGTCGCCA GAGTTTTATT TGATGAGTTT
CGTCACTTAT CCGATACGTT TTCATTTTCG GGAAAATATC AGAGTATTAT GCGTAAGATG
ATCACGCATA TGCAGATAAA TAATGGTGCT CCTTTCCGTG ATTTATTACT GGATAGTGCA
TTAAAAGAGC AGATATTAAG TGATAAATCT AATGATAGTT CATTGCTTAA AATAAAAAAT
GCTTTGATAG AAAATATTGA TTGGAATAAT GGTCATTATC CTATAAATAA CAAAGGAATG
ATGACTGAAG CAATAAAAGA TACAATTTTA CCTAGATTTA ACCGATTAAA TGATAGGATA
AATGGGCTAG GTATTAGTGT TCATGCCATC CATGCAACTC ATATTACTAT TAGGTCATTA
CAAGTCAATG GTAATGAATT TCGTGCAATT GTACACTATC GTTCACAAGA TCACTTTGGC
CTTGACAATA CTGATATGTT GGACTCATTT TATCGCCAAT TTCGTATATT CCATATTTGG
TTTGTTCTCC AGCGTTGGAG AGGATTAGGC TATAAACCTT TCCTGACTAA TATGGAAACC
AGTATAGAAA TTACAGGAAA ACGAAAATAA
 
Protein sequence
MTETNMTEKK APPKTLPLQF PLCIFKTHNR MDDYGAADMK NGDLTEAELK GKFNLRGVSV 
TLDPYTGEKT PTSFAMDHFN KKPKEKVNKA EVARVLFDEF RHLSDTFSFS GKYQSIMRKM
ITHMQINNGA PFRDLLLDSA LKEQILSDKS NDSSLLKIKN ALIENIDWNN GHYPINNKGM
MTEAIKDTIL PRFNRLNDRI NGLGISVHAI HATHITIRSL QVNGNEFRAI VHYRSQDHFG
LDNTDMLDSF YRQFRIFHIW FVLQRWRGLG YKPFLTNMET SIEITGKRK