Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4050 |
Symbol | |
ID | 5385301 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4560084 |
End bp | 4561211 |
Gene Length | 1128 bp |
Protein Length | 375 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 640867078 |
Product | putative carbohydrate diacid regulator |
Protein accession | YP_001402994 |
Protein GI | 153949252 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3835] Sugar diacid utilization regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCAACCA GCTATCTTAA GGAAGACACC GCTCGCCAAA TCGTTCAGCG CGCCATGAGC ATTATTGATT ACTCGGTTAA TGTCATGAAT GAACACGGCG TCATTATTGC GTCTGGTGAT CCTCGCCGTT TACATCAGCG TCATGAAGGT GCCGTTTTAG CGCTGACGGA AAACCGGATG GTCATGATCG ACGAAGCCGT GGCTGGCAGG CTTAAAGGCG TTAAACCAGG AATTAACCTG CCGATTATTT TTCGTCAGCG GATGGTGGGC GTTATTGGGA TTTCGGGTGA ACCCGATAAA GTGCAGGCCT ATGCTGAACT GGTGCGCATG GCGGCCGAGC TGATTTTAGA ACAAGCTGAA ATGTTAGAGC AAAATCAGTG GGAAAAACGC TATCGCGAAC AGTTAACCTC TCAGCTCATT GCCCAGCAAG GCAGTGCGGC TTCAGTGGCA TCAATGGCGG CCTATTTAGG ATTAGACCTC ACACTGCCAC GCATTGCGCT GATCGTCAGT CTGCGTGAAC AAGAGCACGC TCATCAGCGG GATCTGGTCG AAATATTAAG CAACCACAGC CGTGAAACAT TGGTCACTTT ACATGGGTTT GAGCGGGTTG TGGTGTTATT GCCGCTGAAC CTTGCACACA GTGACGATCG TGAAGTGACG GCCAGAAAGG CTTTGCGCAA ATTGTATGCG CTGCTACAGC CGCGTTTTAG TCTGAATATT TATGTTGGTG GCATTTTTGA AGGCCTAAAT GGGCTGCAAC GATCCTATCT TAGCGCGCAA GCGATGCAAG AAACGGCATT GCGACAAAAG CTCACGCAAC CGCTCATGTT CTATCAAGAC CATTTTTTGA CCGTTCTTCT GAATGATTTT GCCGGGAGTT GGCAGGCTGG TGAACTGAGC TCTGCCTGGC AAACACTGCG TCAGGCGGAT AGCAAAGACG TTCTGTGTCA CACTCTGCGT TGTTACTTTG TACAGAATTG TGATCTGTCT CAAACGTCAA AACAACTGCA TATCCATGTC AATACCCTAC GCTATCGGCT ACAGAAGATT GAAGCTATAA CAGCTTTAAA AATCAATGAA TTAAATTCAA TTCTTCAGCT CTATATTGGC ATGAAAATAG AGAGATAA
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Protein sequence | MPTSYLKEDT ARQIVQRAMS IIDYSVNVMN EHGVIIASGD PRRLHQRHEG AVLALTENRM VMIDEAVAGR LKGVKPGINL PIIFRQRMVG VIGISGEPDK VQAYAELVRM AAELILEQAE MLEQNQWEKR YREQLTSQLI AQQGSAASVA SMAAYLGLDL TLPRIALIVS LREQEHAHQR DLVEILSNHS RETLVTLHGF ERVVVLLPLN LAHSDDREVT ARKALRKLYA LLQPRFSLNI YVGGIFEGLN GLQRSYLSAQ AMQETALRQK LTQPLMFYQD HFLTVLLNDF AGSWQAGELS SAWQTLRQAD SKDVLCHTLR CYFVQNCDLS QTSKQLHIHV NTLRYRLQKI EAITALKINE LNSILQLYIG MKIER
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