| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4050 |
|---|
| Symbol | |
|---|
| ID | 5385301 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4560084 |
|---|
| End bp | 4561211 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640867078 |
|---|
| Product | putative carbohydrate diacid regulator |
|---|
| Protein accession | YP_001402994 |
|---|
| Protein GI | 153949252 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3835] Sugar diacid utilization regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 41 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACCA GCTATCTTAA GGAAGACACC GCTCGCCAAA TCGTTCAGCG CGCCATGAGC
ATTATTGATT ACTCGGTTAA TGTCATGAAT GAACACGGCG TCATTATTGC GTCTGGTGAT
CCTCGCCGTT TACATCAGCG TCATGAAGGT GCCGTTTTAG CGCTGACGGA AAACCGGATG
GTCATGATCG ACGAAGCCGT GGCTGGCAGG CTTAAAGGCG TTAAACCAGG AATTAACCTG
CCGATTATTT TTCGTCAGCG GATGGTGGGC GTTATTGGGA TTTCGGGTGA ACCCGATAAA
GTGCAGGCCT ATGCTGAACT GGTGCGCATG GCGGCCGAGC TGATTTTAGA ACAAGCTGAA
ATGTTAGAGC AAAATCAGTG GGAAAAACGC TATCGCGAAC AGTTAACCTC TCAGCTCATT
GCCCAGCAAG GCAGTGCGGC TTCAGTGGCA TCAATGGCGG CCTATTTAGG ATTAGACCTC
ACACTGCCAC GCATTGCGCT GATCGTCAGT CTGCGTGAAC AAGAGCACGC TCATCAGCGG
GATCTGGTCG AAATATTAAG CAACCACAGC CGTGAAACAT TGGTCACTTT ACATGGGTTT
GAGCGGGTTG TGGTGTTATT GCCGCTGAAC CTTGCACACA GTGACGATCG TGAAGTGACG
GCCAGAAAGG CTTTGCGCAA ATTGTATGCG CTGCTACAGC CGCGTTTTAG TCTGAATATT
TATGTTGGTG GCATTTTTGA AGGCCTAAAT GGGCTGCAAC GATCCTATCT TAGCGCGCAA
GCGATGCAAG AAACGGCATT GCGACAAAAG CTCACGCAAC CGCTCATGTT CTATCAAGAC
CATTTTTTGA CCGTTCTTCT GAATGATTTT GCCGGGAGTT GGCAGGCTGG TGAACTGAGC
TCTGCCTGGC AAACACTGCG TCAGGCGGAT AGCAAAGACG TTCTGTGTCA CACTCTGCGT
TGTTACTTTG TACAGAATTG TGATCTGTCT CAAACGTCAA AACAACTGCA TATCCATGTC
AATACCCTAC GCTATCGGCT ACAGAAGATT GAAGCTATAA CAGCTTTAAA AATCAATGAA
TTAAATTCAA TTCTTCAGCT CTATATTGGC ATGAAAATAG AGAGATAA
|
|---|
| Protein sequence | MPTSYLKEDT ARQIVQRAMS IIDYSVNVMN EHGVIIASGD PRRLHQRHEG AVLALTENRM
VMIDEAVAGR LKGVKPGINL PIIFRQRMVG VIGISGEPDK VQAYAELVRM AAELILEQAE
MLEQNQWEKR YREQLTSQLI AQQGSAASVA SMAAYLGLDL TLPRIALIVS LREQEHAHQR
DLVEILSNHS RETLVTLHGF ERVVVLLPLN LAHSDDREVT ARKALRKLYA LLQPRFSLNI
YVGGIFEGLN GLQRSYLSAQ AMQETALRQK LTQPLMFYQD HFLTVLLNDF AGSWQAGELS
SAWQTLRQAD SKDVLCHTLR CYFVQNCDLS QTSKQLHIHV NTLRYRLQKI EAITALKINE
LNSILQLYIG MKIER
|
|---|
| |