| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4037 |
|---|
| Symbol | |
|---|
| ID | 5386169 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4547415 |
|---|
| End bp | 4548743 |
|---|
| Gene Length | 1329 bp |
|---|
| Protein Length | 442 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640867067 |
|---|
| Product | metalloprotease |
|---|
| Protein accession | YP_001402983 |
|---|
| Protein GI | 153948040 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2931] RTX toxins and related Ca2+-binding proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 62 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTACT CCAGGGAACA CCGCAACACT ATAATTAAAA ATGAACATGT CATGCGCAGA
GGCATTCATT ATAAGAATGA AATTAAAGGT GTTATAGCAC CACAAATATC TAGCCATCAG
TCATGGAAAG AAAACACTAT TCATAATAAA AATACAAACC TGACATATTC ATTTAGTCGA
GCATATACAT TATGGGATTA TGATCGAACG TTCCAACAAA ACGCTTATGT CTCATTATTT
AATCCAGCCC AAATCCATCA GGCAAAAATC GCGATGCAAT CTTGGGCTGA TGTAGCCAAC
ATCTCCTTCA CCGAAGCATC AGCAGACTCT TCCGCCAATA TTCTATTTTT AAATTTTCAG
CGCCCAGGCA ATGTGGCAGG TTATGCCTAT CATCCTAATC TAGGGAGTTT CAGCCCAATA
TGGATTAATT ACAGCTTCAG CGATAACCAA CATCCCAGCA GATTAAATTA TGGTGGCGGG
GTATTAACAC ATGAGATTGG CCATGCTCTG GGGTTGGGTC ATTCTCATGC CCCCCATGGC
TACACGCAAC AAATGAGTGT GATGAGCTAT TTATCCGAAC AGGATTCAGG CGCGAACTAT
GGCCAACATT ACTTATCCAC GCCACAAATG TACGATATCG CCGCAATCCA GTATCTGTAT
GGGGCTAATC TACACACCCG CACCGGTGAT ACCGTTTATG GCTTCAACTC GACGAGTTAT
AGAGATCATT TCACCGCCAC CCACGCCAGT GATGCGTTGA TTTTCTGTGT CTGGGATGCT
GGCGGCAATG ATACTTTTGA CTTCTCTGGC TATAAGCAAA ATCAAATGAT TAATCTTAAC
GAACTCTGTT TTTCTGATGT TGGTGGACTA AAAGGAAATG TGTCTATTGC AGCGGATGTT
ACGATTGAAA ATGCCATCGG CGGCAGTGGC CATGATGATA TTATCGGCAA TCACACCAAT
AATATTTTGA CCGGTAACGG CGGATCTGAT CAACTTTGGG GTAACGGGGG CAATAATACT
TTCCGCTATG CCAGTGCCAG AGATTCAATG ACCACCTCGC CCGATACTAT TCATGATTTT
AAATCAGGCC GTGACAAGAT AGATTTGTCG CAATTAATGC CCTCAACCGA CCGTGTTATT
TTTGTCGATA GATTAAGTTT TAACGGTCAA ACAGAGATGG GGCAGCAATA TAATGAAGTG
GCGGACATAA CTTATCTTAT GATCGATTTT GACGCTCAAG TCAGCGAGTG CGATATGATG
ATTAAATTTA CCGGCAGGCA CCATTTCACC GCCAATGACT TTATTTTAAG TACGTCACTG
ACGGCATAA
|
|---|
| Protein sequence | MSYSREHRNT IIKNEHVMRR GIHYKNEIKG VIAPQISSHQ SWKENTIHNK NTNLTYSFSR
AYTLWDYDRT FQQNAYVSLF NPAQIHQAKI AMQSWADVAN ISFTEASADS SANILFLNFQ
RPGNVAGYAY HPNLGSFSPI WINYSFSDNQ HPSRLNYGGG VLTHEIGHAL GLGHSHAPHG
YTQQMSVMSY LSEQDSGANY GQHYLSTPQM YDIAAIQYLY GANLHTRTGD TVYGFNSTSY
RDHFTATHAS DALIFCVWDA GGNDTFDFSG YKQNQMINLN ELCFSDVGGL KGNVSIAADV
TIENAIGGSG HDDIIGNHTN NILTGNGGSD QLWGNGGNNT FRYASARDSM TTSPDTIHDF
KSGRDKIDLS QLMPSTDRVI FVDRLSFNGQ TEMGQQYNEV ADITYLMIDF DAQVSECDMM
IKFTGRHHFT ANDFILSTSL TA
|
|---|
| |