Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4030 |
Symbol | rbsA6 |
ID | 5384858 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4536533 |
End bp | 4538056 |
Gene Length | 1524 bp |
Protein Length | 507 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640867060 |
Product | ribose ABC transporter, ATP-binding protein |
Protein accession | YP_001402976 |
Protein GI | 153948362 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1129] ABC-type sugar transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 47 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAAAG TCCCCCTCTT GGAGATGCGT AATATTACCA AGTCGTTTGG CAAATTTCAG GCGCTTAAAG GTGTCGATTT GACGGTGTTT TCCGGCGAGA TCCACGCGCT GATGGGCGAA AACGGGGCGG GGAAAAGTAC CCTGATGAAG ATCCTTGCTG GCGCATATAC CACCACCAGC GGCGAGATCC TTATTGAGGG TAGGCCTTGG TCCATCAAAG GCCCAAAAGA TGCGCTGAAT GCAGGTATTA GTTTGATTTA CCAAGAGATG CAGCTCGCAC CTAACCTGAC CGTTGCGGAA AATATTTTCC TTGGCAGCGA GCTTTCCCGG GGAGGGCTGG TGCAGCGTAA AGAGATGGTG ATGCAGACCC AGGCGGTTAT CGACCGCCTC GGCGCTCAGT TTAAAGCCAG CGATTTAGTG ATGGGGCTTA CCATCGCCGA ACAACAGCAG GTCGAGATTG CTCGTGCACT TCATCGTAAC AGCCGCATTT TGGTGATGGA TGAACCCACA GCGGCGCTTT CTACTCGTGA AACGCATCGC CTATTTGAAC TTATTTTGCG GCTGCGCGAT GAGGGGATGG CCATTATCTA CATCAGCCAT CGTATGGCGG AAGTGTATGA ACTTTCTGAC CGTGTGAGCG TACTGCGCGA CGGGCAATAC GTCGGCAGCC TGATGCGCGC CAACCTCAAC GCCAACGAAC TGGTGCGCAT GATGGTGGGG CGTCCGCTTA GCGATCTGTT CAATAAAGAA CGGGATATTC CACTCGGTCA TTTACGCCTT AATGTTCATC ACCTGACGGA TGGTGCCAAA GTGCAGGCGG TGAGTTTACA GGTCCGTTCC GGTGAAATCG TTGGGTTAGC GGGGTTGGTG GGCGCAGGGC GTTCGGAGCT GGCGCAACTG ATTTTTGGTG TCCGCAAAGC CACCGGAGGA ACGATAGAGA TAGATGGCGT ACCGTTGGTC ATTCACTCCC CTCGTGAAGC CATTCGCCAC GGTATTGGTT TTCTGACCGA GAACCGCAAA GAGCAAGGGC TGTTTTTGGA ACTGGCCGCG CAGGACAACA TCACTATGGC AACCCTGGAG CGGGACGCCT GTTATGGCCT GCTCGATCGC AAAAAAGCCC GGGCCATTTC AGACGACGCC ATCAATCGGT TGAACATACG TGTACCTCAT GCGCAGGTGC GTGCCGGAGG CTTGTCCGGG GGTAACCAGC AAAAGCTGCT GATTTCCCGT TGGGTGGCGA TTAGCCCACG CATTCTTATC CTTGATGAGC CAACACGTGG AGTGGACGTC GGCGCTAAAA GCGAGATTTA CCGCATCATG AGCCAGATGG CGCGCGAGGG GGTGGCGATT TTGATGATTT CCAGTGAGTT GCCCGAGGTG GTAGGGATGA GCGACCGGGT GTACGTGATG CATGAAGGAC GTATTGCAGG GGAACTGCAT CATGATGATA TCACGCAGGA AAATATTATG ACGCTGGCAA CTGGCGTGAC CGAGGACCAT AAAAAAGAGG TTTACCATGA CTAA
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Protein sequence | MNKVPLLEMR NITKSFGKFQ ALKGVDLTVF SGEIHALMGE NGAGKSTLMK ILAGAYTTTS GEILIEGRPW SIKGPKDALN AGISLIYQEM QLAPNLTVAE NIFLGSELSR GGLVQRKEMV MQTQAVIDRL GAQFKASDLV MGLTIAEQQQ VEIARALHRN SRILVMDEPT AALSTRETHR LFELILRLRD EGMAIIYISH RMAEVYELSD RVSVLRDGQY VGSLMRANLN ANELVRMMVG RPLSDLFNKE RDIPLGHLRL NVHHLTDGAK VQAVSLQVRS GEIVGLAGLV GAGRSELAQL IFGVRKATGG TIEIDGVPLV IHSPREAIRH GIGFLTENRK EQGLFLELAA QDNITMATLE RDACYGLLDR KKARAISDDA INRLNIRVPH AQVRAGGLSG GNQQKLLISR WVAISPRILI LDEPTRGVDV GAKSEIYRIM SQMAREGVAI LMISSELPEV VGMSDRVYVM HEGRIAGELH HDDITQENIM TLATGVTEDH KKEVYHD
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