Gene YpsIP31758_4027 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_4027 
Symbol 
ID5386500 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp4533815 
End bp4534498 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content51% 
IMG OID640867057 
Producthypothetical protein 
Protein accessionYP_001402973 
Protein GI153950355 
COG category[R] General function prediction only 
COG ID[COG3822] ABC-type sugar transport system, auxiliary component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones52 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGCT CCGAGGTCAA CCAAATCCTT AAGCAGACCG GTCATTTCTT TGCCCGACAC 
CATATCCAGC TACCGCCATT TGCCCGTTTC ACGCCACAAA TATGGCAACA GCTTGACCCT 
AAAGCCTGGC AAGAACTGTT TGACCTGAAA CTCGGCTGGG ATATTACCGC ATTCGGCGGG 
AACCATTTTT TTACTCAGGG ATTAACGCTG TTCACCTTAC GCAACGGTTC GGTAAGCGGC 
ACTCCTTACC CTAAATGCTA CGCCGAAAAA ATCATGCACG TCCGCGAAGG CCAGGTGACA 
CCTATGCATT TTCACTGGCG TAAACAGGAA GATATCATCA ACCGTGGCGG CGGCAATCTT 
ATCGTCGAGC TATGGAATTC CGACGCGTTT GAACAAACGG AGAAGAGCGA TGTCACCGTG 
ACACTCGACG GCTGCCGCCA AACCCATGCG GCAGGCAGCC AGTTACGCTT ATCTCCCGGT 
GAAAGCATTT GCCTGGTGCC TGGGGTGTAC CACAGTTTCT GGGGCGAGGT AGGTTACGGT 
GAGGTGCTGG TCGGTGAGGT ATCGATGGTA AATGACGATG ACCACGACAA CCGATTTATG 
AAACCTCTTG AACGTTTTAA TTCGATTATT GAAGACGAAC CGGCTGAACT TGTGCTGTGT 
AATGAGTACT GCCGTTTCGT CTGA
 
Protein sequence
MKRSEVNQIL KQTGHFFARH HIQLPPFARF TPQIWQQLDP KAWQELFDLK LGWDITAFGG 
NHFFTQGLTL FTLRNGSVSG TPYPKCYAEK IMHVREGQVT PMHFHWRKQE DIINRGGGNL 
IVELWNSDAF EQTEKSDVTV TLDGCRQTHA AGSQLRLSPG ESICLVPGVY HSFWGEVGYG 
EVLVGEVSMV NDDDHDNRFM KPLERFNSII EDEPAELVLC NEYCRFV