| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4021 |
|---|
| Symbol | gntT |
|---|
| ID | 5384502 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 4527138 |
|---|
| End bp | 4528454 |
|---|
| Gene Length | 1317 bp |
|---|
| Protein Length | 438 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640867050 |
|---|
| Product | high-affinity gluconate transporter GntT |
|---|
| Protein accession | YP_001402967 |
|---|
| Protein GI | 153950799 |
|---|
| COG category | [E] Amino acid transport and metabolism
[G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2610] H+/gluconate symporter and related permeases |
|---|
| TIGRFAM ID | [TIGR00791] gluconate transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 44 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTAA TCATCGTCGC GGTTGGCGTT GCCATGCTGC TATTACTGAT GATCCGTTAC
AAACTTAACG GATTTATCTC GCTGATACTG GTCGCGTTAG CGGTAGGTAT CATGCAAGGG
ATGCCAATCG ATAAAGTTGT CGGCTCGATC AAAGCGGGTG TCGGCGGAAC ATTAGGTAGC
CTGGCCTTGA TTATGGGCTT CGGGGCCATG CTCGGTAAAT TGCTGGCCGA TTGTGGCGGC
GCTCAACGTA TCGCGACCAC CTTAATTGAG AAGTTTGGTC AAAAACATAT TCAATGGGCT
GTGGTACTGA CCGGCTTTAC TGTGGGTTTT GCCCTGTTTT ATGAAGTGGG TTTTGTGCTG
TTATTGCCGC TGGTATTCAG CATTGCGGCC TCTGCCCGCA TCCCCTTGCT ATATGTGGGT
GTTCCCATGG CCGCGGCGCT TTCTGTCACT CATGGTTTTC TGCCACCTCA CCCAGGCCCG
ACCGCCATTG CCACCATTTT CAGCGCCGAT ATGGGCAAAA CGCTGCTGTA CGGCACGTTG
CTGGCAATCC CAACCGTGAT TTTGGCAGGC CCGGTCTACG CCCGCTTTCT AAAAGGAATT
GATAAGCCTG TTCCTGAAGG GCTGTATAAC CCGAAAATCT TTACCGATAA AGAGATGCCA
AGCTTTGGGG TCAGTGTCAG TACGGCGCTG GTACCGGTTA TTTTGATGGC ATTGCGGGCC
GTAGCAGAGA TGATTTTTCC TAAAGGCCAC TCGCTGCTCC CCTATGCCGA GTTCTTTGGT
GATCCAGTAA TTGCTACGCT GATTGCCGTG TTAATTGCAA TTTTCACCTT TGGTCTAAAC
CGGGGCCGTT CAGTGGAATC GGTCATGGAG ACCCTGTCTG ATTCCATCAA GATCATCGCA
ATGATGCTGT TAGTTATCGG AGGGGGCGGT GCTTTCAAGC AGGTTTTAGT CGATAGCGGC
ATAGAGCAAT ATATTGCTGG CATGATGGGC AATAGCGGGG CATCACCTAT TCTGATGGCA
TGGTCCATCG CCGCCTTACT GCGTATCGCC CTGGGTTCTG CGACGGTGGC AGCGATCACC
GCTGGGGGCA TTGTCGCACC GTTAATCGCG ACCACCGGTG CCAGCCCTGA GTTGATGGTC
ATTGCCGTTG GTTCCGGTAG CGTGATCTTC TCTCACGTGA ATGACCCTGG CTTCTGGCTA
TTCAAGGAGT ATTTCAACCT AACCATTATG GAAACCATTA AATCGTGGTC AGTACTGGAA
ACCATTATTT CAGTCTGCGG GTTGATCGGC TGTTTGTTGC TGTCTCTGGT TATTTAG
|
|---|
| Protein sequence | MPLIIVAVGV AMLLLLMIRY KLNGFISLIL VALAVGIMQG MPIDKVVGSI KAGVGGTLGS
LALIMGFGAM LGKLLADCGG AQRIATTLIE KFGQKHIQWA VVLTGFTVGF ALFYEVGFVL
LLPLVFSIAA SARIPLLYVG VPMAAALSVT HGFLPPHPGP TAIATIFSAD MGKTLLYGTL
LAIPTVILAG PVYARFLKGI DKPVPEGLYN PKIFTDKEMP SFGVSVSTAL VPVILMALRA
VAEMIFPKGH SLLPYAEFFG DPVIATLIAV LIAIFTFGLN RGRSVESVME TLSDSIKIIA
MMLLVIGGGG AFKQVLVDSG IEQYIAGMMG NSGASPILMA WSIAALLRIA LGSATVAAIT
AGGIVAPLIA TTGASPELMV IAVGSGSVIF SHVNDPGFWL FKEYFNLTIM ETIKSWSVLE
TIISVCGLIG CLLLSLVI
|
|---|
| |