| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4012 |
|---|
| Symbol | |
|---|
| ID | 5385622 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 4519967 |
|---|
| End bp | 4520791 |
|---|
| Gene Length | 825 bp |
|---|
| Protein Length | 274 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640867041 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001402958 |
|---|
| Protein GI | 153948309 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 45 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGTGATG GTTTAGTTAT TGCGATGTCT CCTGTTCAGT TAGCCGCTGT ACTTTCTGAT
AAAACTATTA CAGAAGGTGA AACACTCGGT AATCGAATGT GGGGTAGTCT GGAGTTTGCT
TTAGGTGCAC TTGAAATGGT CGGGGCGGCA GTGCTCTGTG TTGCACCAGA GCCAACCGGG
TTAACGAAAG TAGGGTGTGT GGTCGTTGGT GCTCACAGCA TGGATGCAGT AAATACCGCG
GCTAACAAAG TGATTACGGG AATGAATACC CGTACCGCGA CGCACAGGAC AGCAGAAGCA
CTGGCGAAGA AATTTGGTGC CGATGAAGAT ACGGCGTTCA GGATTGGCCT TACCGTTGAT
ATCGCCGTTC CGCTTGGATT TGCGGCTGCA CTTGGTGCGG TAAGAGTGGC CTCTATACGC
TCTGGAAGGA TTAGCCTCCT TAAACATGAA TCTTCAACGG GGATGAAACC GGGCGGGCAT
ACTATAGATA AACATGTCGC TAAGTCACCA GAAGACCTGA TAAAAAGATT TGCCAGCTCC
CCCAATATGA AGGTCTCAAC CTCATTTACC AATTTACGAC TTGCCGAAGA AAGTATTTCC
GATGCGCTAA GATACAACAC TGAATGGATT AAAGTCTGGG CGGCAAGTTC GACGAGGACA
GCATCACCCT TTGTTATTAA TCACTCTGTG GGGCGTGTTA TTGGATATGG GGTAAGGCGC
GGGGAACAGG CCGTAACCAA ATTAACAAAA TTTAGGGTAG TCATTCGGTT TGAGGCATTC
CACGGCAAAC CATACTATAT TCTTACCGCT TACCCCACGT TTTAG
|
|---|
| Protein sequence | MGDGLVIAMS PVQLAAVLSD KTITEGETLG NRMWGSLEFA LGALEMVGAA VLCVAPEPTG
LTKVGCVVVG AHSMDAVNTA ANKVITGMNT RTATHRTAEA LAKKFGADED TAFRIGLTVD
IAVPLGFAAA LGAVRVASIR SGRISLLKHE SSTGMKPGGH TIDKHVAKSP EDLIKRFASS
PNMKVSTSFT NLRLAEESIS DALRYNTEWI KVWAASSTRT ASPFVINHSV GRVIGYGVRR
GEQAVTKLTK FRVVIRFEAF HGKPYYILTA YPTF
|
|---|
| |