| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_4005 |
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| Symbol | glgX |
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| ID | 5388030 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4495964 |
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| End bp | 4497952 |
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| Gene Length | 1989 bp |
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| Protein Length | 662 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640867035 |
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| Product | glycogen debranching enzyme |
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| Protein accession | YP_001402952 |
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| Protein GI | 153948572 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1523] Type II secretory pathway, pullulanase PulA and related glycosidases |
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| TIGRFAM ID | [TIGR02100] glycogen debranching enzyme GlgX |
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Plasmid Coverage information |
| Num covering plasmid clones | 48 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGGTAT TAACCCATGG ATCACCGACA CCTTCTGGCG CCTACTTTGA TGGGAAGGGC
ATTAATTTCA CACTATTTTC AGCCCATGCT GAGCAGGTGA CGTTGTGTCT GTTTGATGAG
CAGGGGCAAG AGCGGCAGAT AGCCATGCCT GCTCGTACCG GTGACATCTG GCATGGCTAT
CTTCCCGGCG GCAAGCCGGG GCAACGCTAT GGTTACCGGG TCAGCGGGCC TTTCGACCCC
AGTCGAGGCC ACCGTTTTAA CCCACATAAG TTGTTGATAG ACCCCCGAAC TCGTGCGTTA
GAAGGCAAGG TTGGTGATGA TCCCCGTTTT ACCGGTGGCG TTAGCCAGCC CGATGTCCGC
GACAGTGCGG CGGCGTTACC TAAATGTCTT GTGATACACG AGGAATATGA CTGGCAGGGG
GATAAACCGC CCGCCATTCC TTGGGGTAAT ACCGTGATTT ATGAAGCCCA TGTCCGTGGT
TTAACCCAAT TACATCCTGA TATTCCGCCA GAGCTGCGCG GTACCTATGC CGCCTTGGCA
CACCCTGCTC TGATTGAACA TCTCAAAACA TTGGGGATTA CCACACTGGA GTTGCTGCCA
GTGCAATTTC ATATTGATGA ACCCCGGCTA CAAAAAATGG GGCTGAGCAA TTACTGGGGC
TATAACGTGT TAGCGCCCTT TGCGGTGGAT CCAGATTATG CCTCGGGCCG CGAGGGCATA
TCACCGCTGA GAGAACTACG GGATGCGATT AAAGCCCTGC ATAACGCGGG CATTGAAGTC
ATTCTGGATG TGGTGTTCAA CCACAGCGCT GAGTTGGATG TCTTCGGCCC GACCTTGTGT
CAGCGTGGTA TCGACAATGC CAGCTACTAC TGGCTGACCC CTGATGGTGA ATACGACAAC
ATCACGGGCT GCGGCAATGC ACTGCGCCTC AGTCATCCGT ATGTCACACA GTGGGTTATT
GATTGCCTAA ATTATTGGCG CGATAGCTGC CATGTGGACG GCTTTCGTTT TGACTTAGGC
ACGGTACTGG GCCGCACACC GGCGTTCGAT CAACATGCGC CTTTATTTGC CGCCTTGGCG
GCCGATGAGC GGCTCAGCGC CTGCAAATTG ATTGCAGAAC CTTGGGATAT CGGTCTGGGC
GGTTATCAAT TGGGGAACTT CCCCACCGGC TTTAGCGAAT GGAATGACCA GTACCGCGAT
GCCATGCGCG GTTTCTGGCT ACGAGGGGAG GTGCCGCGCG GTACCTTTGC CCAGCATTTT
GCTGCTTCAA GCCGCCTGTT TGAACAGCGA GGGCGCTTAC CCTCTGCCAG CATTAATCAA
ATTACCGCCC ATGATGGTTT CACCTTGCTG GATTTGCTGT GTTTTAACCA AAAACATAAC
CAAATGAATG GCGAAGAAAA TCGTGATGGC AGTGATAACA ACCATAGCAA TAATTTTGGT
TGTGAAGGCT TGGTGGCTGA CGCGGCTATC TGGCAACGGC GTAAAGCCTG TCAGCGGGCG
CTACTGACCA CCTTATTACT CTCGCAGGGA ACGCCGATGT TACTGGCCGG TGACGAACAG
GGCCACAGCC AGCAAGGCAA CAACAATGCT TATTGTCAGA ACAACATCCT CACCTGGCTC
GATTGGGGCA GTGCGGATCG TGCATTAATG ACGTTTACCG CTGACCTTAT CCGGCTGCGC
CAGCAAATCC CAGCCCTGAC TCAGGACCAA TGGTGGCAGA GCGGCGATAG TAATGTGCAA
TGGTTGGATA GTCAGGGACA GGCGCTGAGT GATGCTGCTT GGGAGCAAGG CTGCCAGCAG
CAACTACAGA TTTTGTTATC TCAGCGCTGG TTGGTGCTCA TCAATGCCAC TGATCACGAG
TGTGAAATGC ACTTACCTGA AGGGGAATGG GAGGGGATTC CTCCCTTTGG GGTGTCAGAC
CATGCGGAGC GATTAACCAC ATGGCGCGGG TCCGCGCATA CCATTTGTGT GCTCATAAAG
AGAGATTAA
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| Protein sequence | MAVLTHGSPT PSGAYFDGKG INFTLFSAHA EQVTLCLFDE QGQERQIAMP ARTGDIWHGY
LPGGKPGQRY GYRVSGPFDP SRGHRFNPHK LLIDPRTRAL EGKVGDDPRF TGGVSQPDVR
DSAAALPKCL VIHEEYDWQG DKPPAIPWGN TVIYEAHVRG LTQLHPDIPP ELRGTYAALA
HPALIEHLKT LGITTLELLP VQFHIDEPRL QKMGLSNYWG YNVLAPFAVD PDYASGREGI
SPLRELRDAI KALHNAGIEV ILDVVFNHSA ELDVFGPTLC QRGIDNASYY WLTPDGEYDN
ITGCGNALRL SHPYVTQWVI DCLNYWRDSC HVDGFRFDLG TVLGRTPAFD QHAPLFAALA
ADERLSACKL IAEPWDIGLG GYQLGNFPTG FSEWNDQYRD AMRGFWLRGE VPRGTFAQHF
AASSRLFEQR GRLPSASINQ ITAHDGFTLL DLLCFNQKHN QMNGEENRDG SDNNHSNNFG
CEGLVADAAI WQRRKACQRA LLTTLLLSQG TPMLLAGDEQ GHSQQGNNNA YCQNNILTWL
DWGSADRALM TFTADLIRLR QQIPALTQDQ WWQSGDSNVQ WLDSQGQALS DAAWEQGCQQ
QLQILLSQRW LVLINATDHE CEMHLPEGEW EGIPPFGVSD HAERLTTWRG SAHTICVLIK
RD
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