Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_4000 |
Symbol | glpD |
ID | 5387535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4488734 |
End bp | 4490248 |
Gene Length | 1515 bp |
Protein Length | 504 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640867030 |
Product | glycerol-3-phosphate dehydrogenase |
Protein accession | YP_001402947 |
Protein GI | 153947656 |
COG category | [C] Energy production and conversion |
COG ID | [COG0578] Glycerol-3-phosphate dehydrogenase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 41 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGAAACCA AAGACTTGAT CGTGATCGGT GGCGGTATTA ACGGTGCCGG TATCGCTGCG GACGCTGCTG GGCGTGGCCT GTCGGTACTG CTGCTGGAAG CGCAAGACTT GGCCTGTGCT ACGTCTTCCG CCAGTTCCAA ACTTATCCAT GGTGGCTTAC GCTATCTGGA ACATTATGAA TTCCGCTTGG TAAGTGAAGC CTTGGCCGAG CGTGAAGTGT TACTGAAACT GGCACCGCAT ATCGCATTCC CTATGCGCTT CCGCCTACCC CACCAGCCTC ATCTGCGCCC GGCATGGATG ATCCGCACCG GCTTGTTCTT GTATGACCAT TTGGGCAAAC GTACCAGCCT GCCAGCCAGT AAAGGGCTGC GTTTTGGGCC GGAATCTGTG TTAAAACCCG AGTTGGTGCG CGGTTTCGAA TATTCTGACT GTTGGGTGGA TGATGCCCGC CTGGTGGTGC TGAATGCGCA GGAAGTGGTT AAACACGGTG GTGAAGTCCG TACCCGTACC AAAGTGACCC GTGCCTGGCG TGAACAAGGC CTATGGATGG TTGAAGCCCT TGATGTCAAT ACCGGCAAAA CCTTCACCTG GCGGGCTAAA GGCTTAGTGA ATGCCACTGG CCCTTGGGTT AAACAGTTCT TCGACGATGG CCTAAAGCTC AAATCACCTT ATGGCATCCG CCTAATTAAA GGCAGCCACA TTGTGGTGCC CCGGGTTCAT AACCAACCGC AGGCGTATAT TCTGCAAAAT GAAGATCACC GTATCGTTTT CGTTATCCCT TGGTTAGATG ACTATTCCAT CATCGGTACT ACCGACGTGG AATACCACGG CGATCCAAAA GAGGTGAAAA TTGACGATCA GGAAATGACT TATCTGCTGA AAGTCTATAA CGACCACTTT AAAAAACAGT TGGGTCGTGA CGATATCGTC TGGACCTACT CTGGTGTGCG CCCGCTATGC GACGATGAAT CAGATTCACC GCAAGCCGTT ACCCGCGATT ACACGCTAGA TGTGGCCGAT GAAGCGGGTC AGGCACCACT CCTGTCGGTC TTCGGCGGTA AACTCACCAC CTACCGTAAA TTGGCAGAAC ATGCGCTGGA AAAACTGTCA GCGTACTACC CGAATGTCGG CCCAGCGTGG ACTAAAACCG GTGCCTTGCC CGGTGGGGAT ATCGGCGGTA GTCGTGATAG CTATACCGTG CAATTGCGCC ACCGCTATAA CTGGTTGCCG GAAGGGTTGG CCCGCCGCTA TACCCGTACC TATGGTAGCC ACAGCGAGCT AATTTTAGCC AATGCGACCC GTCTTGAAAG CCTGGGTGAG CACTTTGGTC ACGGCTTGTA TGAGGCTGAA TTGCGCTATT TGGTTGAGAA CGAGTGGGTC GTTGAGCTGG ATGATGCTAT CTGGCGCCGT ACCAAATTAG GCATGGCCCT CAGCGATGAA GAGAAACAGC GGGTAGCCCA GTGGCTGGCT GATGCGCACA CTGAAAAACA ACAGGCGCTG CCGCTGGTTT CTTAA
|
Protein sequence | METKDLIVIG GGINGAGIAA DAAGRGLSVL LLEAQDLACA TSSASSKLIH GGLRYLEHYE FRLVSEALAE REVLLKLAPH IAFPMRFRLP HQPHLRPAWM IRTGLFLYDH LGKRTSLPAS KGLRFGPESV LKPELVRGFE YSDCWVDDAR LVVLNAQEVV KHGGEVRTRT KVTRAWREQG LWMVEALDVN TGKTFTWRAK GLVNATGPWV KQFFDDGLKL KSPYGIRLIK GSHIVVPRVH NQPQAYILQN EDHRIVFVIP WLDDYSIIGT TDVEYHGDPK EVKIDDQEMT YLLKVYNDHF KKQLGRDDIV WTYSGVRPLC DDESDSPQAV TRDYTLDVAD EAGQAPLLSV FGGKLTTYRK LAEHALEKLS AYYPNVGPAW TKTGALPGGD IGGSRDSYTV QLRHRYNWLP EGLARRYTRT YGSHSELILA NATRLESLGE HFGHGLYEAE LRYLVENEWV VELDDAIWRR TKLGMALSDE EKQRVAQWLA DAHTEKQQAL PLVS
|
| |