Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3993 |
Symbol | malP |
ID | 5387241 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4478195 |
End bp | 4480600 |
Gene Length | 2406 bp |
Protein Length | 801 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640867024 |
Product | maltodextrin phosphorylase |
Protein accession | YP_001402941 |
Protein GI | 153947967 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0058] Glucan phosphorylase |
TIGRFAM ID | [TIGR02093] glycogen/starch/alpha-glucan phosphorylases |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 46 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTCACAGC CTATGCTTAA AAAGGACGAT TTTCTGGCCG CCCTGACTCG CCAGTGGCAG CGCTTTGGCT TAACCTCCGC TCAGCAAATG ACCCCGTATC AATGGTGGGA AGCTGTCAGC GCTGCGTTAG CCGAACAGTT ATCTGCTCAG CCCGCACCGA GCAAACCAAA AAATGTACAA CGCCATGTCA ACTACATTTC GATGGAGTTT TTAATTGGTC GTTTGACAGC TAATAACCTA ATTAATCTGG GTTGGTATGA CACGGTGGAC GCGCTGTTAG CGGAGCAGCA GGTTAAGCTG AGTGATTTGT TAGAGCAAGA AACGGACCCA GCATTGGGCA ACGGGGGCTT AGGGCGTTTG GCGGCTTGTT TTCTTGACTC AATGGCAACC GTTGAGCAAC CGGCAACGGG CTATGGGCTG AATTATCAAT ATGGCCTGTT CCGCCAGTCT TTCCGTGAAT GTAAACAGCA AGAAGCGCCG GATAATTGGC AGCGGGAGAG TTACCCGTGG TTTCGCCACA ATGCGGCATT GGCCGTTGAT GTGGGGTTTG GCGGTAATCT GGTCAAGCAA GCCGATGGCC GCCAATTATG GCGTCCGGCC TTTACCTTGC GCGGTGAAGC GTGGGATTTA CCGGTGTTGG GTTTCCGTAA CGGCGTGACA CAACCGCTAC GTTTGTGGCA GGCGACGCAC CAGCATCCGT TTGATTTAAC CCTTTTTAAC GATGGCAAAT TCTTGCTGGC GGAACAAAAT GGTGTTGAAG CAGAAAAACT GACCAAAGTA CTGTACCCGA ATGATAACCA TCTGGCCGGC AAACGCCTGC GCCTGATGCA GCAATATTTC CAGTGTGCCT GTTCGGTCGC CGATATTTTG CGGAAGCACC ATTTGGCGGG CCGTAAACTG GCTGAACTGC CGGACTATGA AGTTATTCAG CTCAACGATA CCCACCCAAC AATCGCTATC CCGGAAATGC TGCGGGTCCT GCTGGATGAG CATCAACTCA GTTGGGATGC CGCTTGGGCG ATTACCAGCA AAACATTCGC TTATACCAAT CATACGTTGA TGCCAGAAGC CCTTGAATGC TGGGATGAAA AACTGGTACG CAGTTTGTTG CCACGCCATT TTGTCATCAT CAAGCAGATC AATGCGCAGT TTAAAAAGCT GGTGAACAAA CAGTGGCCAG GCAATGACGA GGTGTGGGCC AAACTGGCGG TACATCATAA TAAACAGGTG CGGATGGCGA ATCTGTGTGT GGTCAGCGGC TTTGCTGTCA ACGGCGTCGC CCAGTTGCAT TCGGATCTCA TTATCAAAGA TCTGTTCCCT GAGTATTACC AATTGTGGCC AAATAAATTC CACAATGTAA CGAATGGTAT TACGCCGCGC CGTTGGTTGA AACAATGTAA CCCGGCACTC TCTGGTTTGA TTGATGACAC CTTGAAGGTG GAATGGGCCA ACGATCTGGA TGTTTTGCAA GACTTGGAAC CCTACGCTGA GGATCCGGCT TTCCGTCAGC GTTATCAGCA GATTAAGTAT GATAACAAGG TTAAATTAGC GCATTACGTC AAGCGCGTTA TGGGGCTGGT TATCAATCCC GACGCTATTT TTGACGTACA GATTAAACGG CTACATGAAT ATAAACGTCA GCATTTGAAT TTGTTGCATA TCTTGTCGTT GTATCGCCAG ATCCGTGACA ACCCGGCACT GGATATCGCA CCCCGGGTGT TCCTGTTTGG TGCCAAAGCT GCACCAGGCT ATTATTTAGC CAAGAATATT ATTTATGCGA TTAATCAGGT TGCCGACAAG ATCAACAATG ATCCGATCGT TCAAGATCGT CTGAAAGTGG TGTTTATCCC CGACTACCGT GTTTCTGTCG CCGAATTGAT GATCCCCGCA GCAGATGTAT CTGAACAGAT ATCCACAGCA GGCAAAGAAG CCTCGGGTAC CGGCAACATG AAAATGGCGC TAAATGGGGC GTTGACGGTC GGGACGCTGG ACGGTGCTAA CGTTGAAATC GCCGAGCAAG TGGGCGATGA GAATATCTTT ATCTTTGGTC ACACGGTTGA TCAAGTGAAA GCCATTCTGG CGAAGGGGTA TCAGCCAAAG AAATACGTGA AAGCAGACCC ACATCTGAAA AGTATTCTGG ATGAATTGGC CAGTGGTGCG TTCAGTCAGG GTGATAAGCA GGCATTCGAC ATGATGTTGC ACAGCTTATT AGAGGGGGGC GACCCTTATC TGGTATTGGC TGACTTTGCC TCCTACTGCC AGGCGCAGAA ACAAATTGAT GCGCTGTACC GTGATAAGGA TGAGTGGACC CGCCGTGCCA TTCTTAACAC CGCCCGAGTC GGGATGTTCA GCTCTGACCG TTCTATTCGC GATTATCAAC AGCGAATTTG GCAAGCCAAA CGTTAA
|
Protein sequence | MSQPMLKKDD FLAALTRQWQ RFGLTSAQQM TPYQWWEAVS AALAEQLSAQ PAPSKPKNVQ RHVNYISMEF LIGRLTANNL INLGWYDTVD ALLAEQQVKL SDLLEQETDP ALGNGGLGRL AACFLDSMAT VEQPATGYGL NYQYGLFRQS FRECKQQEAP DNWQRESYPW FRHNAALAVD VGFGGNLVKQ ADGRQLWRPA FTLRGEAWDL PVLGFRNGVT QPLRLWQATH QHPFDLTLFN DGKFLLAEQN GVEAEKLTKV LYPNDNHLAG KRLRLMQQYF QCACSVADIL RKHHLAGRKL AELPDYEVIQ LNDTHPTIAI PEMLRVLLDE HQLSWDAAWA ITSKTFAYTN HTLMPEALEC WDEKLVRSLL PRHFVIIKQI NAQFKKLVNK QWPGNDEVWA KLAVHHNKQV RMANLCVVSG FAVNGVAQLH SDLIIKDLFP EYYQLWPNKF HNVTNGITPR RWLKQCNPAL SGLIDDTLKV EWANDLDVLQ DLEPYAEDPA FRQRYQQIKY DNKVKLAHYV KRVMGLVINP DAIFDVQIKR LHEYKRQHLN LLHILSLYRQ IRDNPALDIA PRVFLFGAKA APGYYLAKNI IYAINQVADK INNDPIVQDR LKVVFIPDYR VSVAELMIPA ADVSEQISTA GKEASGTGNM KMALNGALTV GTLDGANVEI AEQVGDENIF IFGHTVDQVK AILAKGYQPK KYVKADPHLK SILDELASGA FSQGDKQAFD MMLHSLLEGG DPYLVLADFA SYCQAQKQID ALYRDKDEWT RRAILNTARV GMFSSDRSIR DYQQRIWQAK R
|
| |