Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3988 |
Symbol | bioH |
ID | 5387769 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4473566 |
End bp | 4474342 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640867019 |
Product | carboxylesterase bioH |
Protein accession | YP_001402936 |
Protein GI | 153950185 |
COG category | [R] General function prediction only |
COG ID | [COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) |
TIGRFAM ID | [TIGR01738] putative pimeloyl-BioC--CoA transferase BioH |
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Plasmid Coverage information |
Num covering plasmid clones | 61 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAGCAGC TTTATTGGTA CACCTGCGGT GAAGGCGATT GCGATCTTGT GTTGTTGCAC GGATGGGGGC TGAATAGCGG GGTATGGCAT TGCATTATTG ATCGACTTGC GCCGCATTTT CGTCTGCATT TGGTGGACCT GCCGGGTTAT GGGCGCAGCC AAGATTATGG TGCGATGTCA CTGGCTGACA TGGCCGAGAG AGTGGCACAG CAAGCGCCGA AACAGGCATT GTGGCTTGGG TGGTCAATGG GGGGATTGGT CGCTAGCCAA ATAGCCCTGA GCCAGCCAGA GTGTGTCAGG GGGCTGATCA CCGTCTCCTC TTCTCCCTGC TTTACCGCGC GTGATGAATG GCCGGGTATC AAGCCGGAAG TGCTGGCAGG TTTTCAACAT CAGCTAAGTG ATGATTTTCA TCGGACAGTA GAACGCTTTT TGGCCTTGCA AACCTTAGGG ACTGAAAGTT CGCGTCAGGA TGCCCGTTTG CTAAAATCTG TCGTGCTACA GCATCAAATG CCCGATGTTG AGGTATTGAC CGGGGGGTTG GCGATCTTGC GCACGGCGGA TCTACGTACA GCACTGGCTG GTTTTACGCT GCCTTTTATG CGCGTTTACG GTCATCTGGA CAGTTTGGTC CCACGTAAAG TGGCATCGCT ATTAGACAGC GCCTGGCCGC AAACCCAGTC GGTGGTCATG CAAGGGGCTG CTCATGCCCC CTTTATTTCT CACCCCAATG ATTTCGCCAA ATTAATCCTG AATTTTGCTG AAGAAAACAA AAAATAA
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Protein sequence | MKQLYWYTCG EGDCDLVLLH GWGLNSGVWH CIIDRLAPHF RLHLVDLPGY GRSQDYGAMS LADMAERVAQ QAPKQALWLG WSMGGLVASQ IALSQPECVR GLITVSSSPC FTARDEWPGI KPEVLAGFQH QLSDDFHRTV ERFLALQTLG TESSRQDARL LKSVVLQHQM PDVEVLTGGL AILRTADLRT ALAGFTLPFM RVYGHLDSLV PRKVASLLDS AWPQTQSVVM QGAAHAPFIS HPNDFAKLIL NFAEENKK
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