Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3972 |
Symbol | mrcA |
ID | 5387218 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 4453584 |
End bp | 4456139 |
Gene Length | 2556 bp |
Protein Length | 851 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640867003 |
Product | peptidoglycan synthetase |
Protein accession | YP_001402920 |
Protein GI | 153950440 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGTTCG TAAAGTATTT TTTAATCCTT GCGGTGTGTT GCATTTTACT GGGAGCAGCC TCGATATTTG GCCTGTACAA ATATATTGAG CCGCAGCTAC CCGATGTTGC CACGCTGAAA GACATCCGGC TGCAAACACC TATGCAGGTG TATAGCGCCG AAGGCGAATT GATCGCTCAA TTCGGCGAAA AACGTCGTAT CCCATTGACG TTGAATCAAA TACCACCAGA AATGGTGCAT GCGTTTATCG CCACAGAAGA CAGCCGTTTT TATGATCATC ACGGTGTCGA CCCTGTGGGG ATCCTGCGTG CAGTCTCTAT CGCCATGTTG TCTGGTCGCG CCTCCCAAGG GGCGAGTACC ATTACCCAGC AATTGGCGAG GAACTTCTTT TTAAGCCCTG AACGGACTTT GATGCGAAAA ATCAAGGAAG CATTTCTGGC TATCCGCATC GAACAGATGC TGACCAAAGA TGAAATCCTT GAGCTGTATC TGAACAAAAT TTATCTCGGT TACCGCGCCT ATGGTGTCGG TGCTGCGGCC CAAGTCTATT TCGGCAAAGA AGTCCATGAA TTGACCCTCA GCCAAATAGC GATGATCGCC GGGTTACCTA AAGCGCCTTC TACGTTTAAC CCGCTCTACT CACATGACAG AGCCGTGGCA CGGCGTAATG TGGTGCTGCT ACGTATGCTG GATGAAAAAT ACATCACTCA GGCGCAATAC GATCAAGCCC GCAGTGAAGA GTTGGTGGCT AACTACCATG TACCGCAAAT CGCCTTTTCA GCGCCCTATC TGGCTGAAAT GGTGCGTCAG GAGATGATTA AACGTTACGG TGAAAATGCG TATACCGACG GTTATCAGGT CTATACCACG ATTACCAGAA AGCTACAGTT GGCGGCAGTT GATTCATTAC GCGCCAACGT GCTGGCTTAT GATATGCGCC ATGGCTATCG CGGCCCGTCC AATGTGTTAT GGAAGGTGGG CGAAAGTGCC TGGAGCCGTG AACAGATTAT CGATTCACTG AAAGCATTGC CGGTGTATGG CCCGCTGTTA CCTGCAGTAG TCACCGAGGC GGATGCCGCA CAAGCTACGG CAATGCTGGC TGATGGCAGC AACGTGACCT TGCCGATGGT CGGTATACGG TGGGCGCGTC CGTTTAAATC GGATAACGCC CAAGGTCCGG TCCCCAAAAA AGCGACTGAT GTCGTTCAGC CTGGTCAGCA AATTTGGGTC AGAAAGGTCG ATGATAACTG GTGGCTGGCT CAAGTGCCGG ACGTCAATTC TGCGCTGGTG TCTATCGATC CCAATAACGG TGCAATTAAA GCGCTAGTAG GCGGTTTTGA TTTTAACCAA AGCAAATTTA ACCGGGCAAC GCAGGCACTG CGTCAGGTTG GCTCGAATAT TAAGCCATTC CTGTATACCG CCGCGATGGA CAAAGGCCTG ACGCTGGCCA CTATCCTCAA TGACCTGCCA ATCACCCGTT GGGATTCTGG CGCAGGCACC GACTGGCGGC CAAAAAACTC ACCTCCCACT TACGATGGCC CTATCCGTTT GCGTCAGGGT TTAGGCCAAT CGAAAAACGT GGTCATGGTG CGGGCAATGC GGGCCATGGG GGTGGATTAC GCGGCTGAGT ATTTGCAGCG CTTTGGTTTC CCTGCGCAGA ATATCGTGCA TTCAGAATCA CTGGCTCTGG GTTCTGCCTC CTTTACACCA TTACAGCTAG TCCGTGGCTA TGCCGTGCTA GCAAATGGCG GTTACCTGGT TGATCCGTAC TTCATCACTA AAATCACTGA TGATGTCGGT AATGTTCTGT TTGAAACAAA GCCGAAGGTT GTCTGTGATA ACTGTAACTT GCCGGTCATT TACGGTGATA CCCAACGTTC AGTTGTACTT TCTGACGACA ATATTGAGAA CGTTGCAACC TCGCAGAACC AGAATGCCAG TAACGTGCCA ATGCCAGAGC TGGAACAGGT GACACCGGCA CAAACGACGC TAAATAGCGA ACAGCAATAT GCGCCACACG TGATAAGCAC CCCGCTGGCG TTCTTGATGC GTGATGCATT GAATTCTAAT ATTTTCGGGG AACCTGGCTG GATGGGTACG GGCTGGCGTG CGGGTCGTGA CCTGAAACGT AAGGATATCG GCGGTAAAAC GGGTACGACA AACAGCTCGA AGGATGCCTG GTTCTCCGGC TACGGCCCAG ATACCGTGAC ATCCGTCTGG ATTGGCTTTG ATGACCATCG CCGTAATTTG GGCCGCAGCA CGGCATCAGG GGCGATACCA GACCAAATTT CCGGAGCAGA AGGCGGGGCG AAGACGGCCC AGCCAGCATG GAATGACTTT ATGAAGGTGG CGCTTGAGGG CTTGCCAGAG AAGCAGGTTC CACCACCACC GGGTATCGTC AGTGTCGTAA TTGATAAGCA AACAGGCAAG TTATCTAATG GCGGGCCGGG CAGCCGCTCA GAGTACTTTA TCGACGGGAC ACAACCCACT GAGCATACGG TACATGAAGT TGGTACCACA TTGATGGATA ACGGCCAGAC TCACGAACTG TTCTGA
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Protein sequence | MKFVKYFLIL AVCCILLGAA SIFGLYKYIE PQLPDVATLK DIRLQTPMQV YSAEGELIAQ FGEKRRIPLT LNQIPPEMVH AFIATEDSRF YDHHGVDPVG ILRAVSIAML SGRASQGAST ITQQLARNFF LSPERTLMRK IKEAFLAIRI EQMLTKDEIL ELYLNKIYLG YRAYGVGAAA QVYFGKEVHE LTLSQIAMIA GLPKAPSTFN PLYSHDRAVA RRNVVLLRML DEKYITQAQY DQARSEELVA NYHVPQIAFS APYLAEMVRQ EMIKRYGENA YTDGYQVYTT ITRKLQLAAV DSLRANVLAY DMRHGYRGPS NVLWKVGESA WSREQIIDSL KALPVYGPLL PAVVTEADAA QATAMLADGS NVTLPMVGIR WARPFKSDNA QGPVPKKATD VVQPGQQIWV RKVDDNWWLA QVPDVNSALV SIDPNNGAIK ALVGGFDFNQ SKFNRATQAL RQVGSNIKPF LYTAAMDKGL TLATILNDLP ITRWDSGAGT DWRPKNSPPT YDGPIRLRQG LGQSKNVVMV RAMRAMGVDY AAEYLQRFGF PAQNIVHSES LALGSASFTP LQLVRGYAVL ANGGYLVDPY FITKITDDVG NVLFETKPKV VCDNCNLPVI YGDTQRSVVL SDDNIENVAT SQNQNASNVP MPELEQVTPA QTTLNSEQQY APHVISTPLA FLMRDALNSN IFGEPGWMGT GWRAGRDLKR KDIGGKTGTT NSSKDAWFSG YGPDTVTSVW IGFDDHRRNL GRSTASGAIP DQISGAEGGA KTAQPAWNDF MKVALEGLPE KQVPPPPGIV SVVIDKQTGK LSNGGPGSRS EYFIDGTQPT EHTVHEVGTT LMDNGQTHEL F
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