| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3971 |
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| Symbol | |
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| ID | 5388223 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4452568 |
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| End bp | 4453464 |
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| Gene Length | 897 bp |
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| Protein Length | 298 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640867002 |
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| Product | hypothetical protein |
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| Protein accession | YP_001402919 |
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| Protein GI | 153947846 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.179616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTACTCAC AATATTGGCA GGTAGGGCTA GATATTCAAA TGGAGGCCAT CCGAGCGTTG
GCCGTGATAC GACGCCGTAA TGGCTGGCAA CTGCGCTACT GGTGGCATCA AGTCTTACCT
TCTGGCGTTT TGCGGGAAGG CATATTACAT CAGCCTGATA TTCTTAGCGA ACAACTCAAA
TTATTACGTA AACAGCTGCC TCGACATATT TCATTACGTA TTGCTTTGCC CGCACAGCGC
ATATTGCAGC ACACCATTCA TGTGCCGGAT AGGCGTCTGC GTGAACCCGA ACGTGATGGT
TTTATTAAAG CCAGTGCCAG CAGACTATTT CCGGTTAACA GCCAGGCTTT GGCACTGGAT
TACTGCCGCG AAACGGTTGC GAGTAGCGAA TTATTGATAA CCGCAGCGCG TCAGTCAGAG
GTGCAGCAAT GGCAAGCCTG CTTGGAACAG GCGGGTTTAT CCTCACAAGT GATTGATATT
GCGCCATGCG CTTTACGTTA TATGGCAACA GCGGCCGGTT TATCTGGGCC ATATTGGCTG
GTTCACCGGT TGGCAAATGA ATGGCTGTGG GTATCGTCCA GTGACATGCC ATTTCATTCC
GGGGTGGTGG CTATCGAGAC AGAGTGCAGA ACGCAGGAAA ATGATATTCG CTTGCTGTCG
GCCCTATTGG CTCAGCTCAA CATGCGCGGT GCTGGTGAAG ATGGCGCGCC TTTGCCGGTG
TATTACAGCA GTGTAGTAAA GGAGTCGTTG CCGGAAAACA CACGGTCTTG GTCGCCGCTA
ACGGCTTTTG CGCACTATCA ACCCCCATTA CCCGCGTTAC CGGCAGCTTT TACTTTGGCC
GGGGGGCTGG CGGTACGTGC GGCAGACTCT TTATCTGCTG CGGGTGCGGG CTACTGA
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| Protein sequence | MYSQYWQVGL DIQMEAIRAL AVIRRRNGWQ LRYWWHQVLP SGVLREGILH QPDILSEQLK
LLRKQLPRHI SLRIALPAQR ILQHTIHVPD RRLREPERDG FIKASASRLF PVNSQALALD
YCRETVASSE LLITAARQSE VQQWQACLEQ AGLSSQVIDI APCALRYMAT AAGLSGPYWL
VHRLANEWLW VSSSDMPFHS GVVAIETECR TQENDIRLLS ALLAQLNMRG AGEDGAPLPV
YYSSVVKESL PENTRSWSPL TAFAHYQPPL PALPAAFTLA GGLAVRAADS LSAAGAGY
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