Gene YpsIP31758_3966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3966 
SymbolaroK 
ID5387105 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand- 
Start bp4448559 
End bp4449080 
Gene Length522 bp 
Protein Length173 aa 
Translation table11 
GC content48% 
IMG OID640866997 
Productshikimate kinase I 
Protein accessionYP_001402914 
Protein GI153949876 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value1.60057e-17 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGAGA AACGCAATAT CTTTCTGGTT GGGCCTATGG GTGCCGGCAA AAGCACTATT 
GGTCGTCAGT TAGCTCAGCA ACTCAATATG GAGTTTTTCG ACTCTGATCA AGAAATTGAG 
CGACGTACCG GAGCTGACGT GGGCTGGGTA TTCGACGTGG AAGGCGAAGA AGGTTTCCGC 
GATCGTGAAG AAAAAGTGAT TAATGAACTG ACGGAAAAGC AAGGCATTGT TCTGGCAACC 
GGTGGGGGCT CTGTTAAATC CAGAGAAACC CGCAACCGTT TGTCAGCCCG TGGGGTTGTG 
GTGTATTTAG AAACCACTAT CGAGAAGCAG TTAGCCCGTA CACAGCGTGA CAAAAAACGT 
CCGTTGCTAC AGGTCGATGA ACCTCCACGT GAAGTGTTAG AAGCACTGGC AAAAGAACGT 
AATCCGTTGT ACGAAGAAAT TGCAGATGTC ACTATCCGCA CTGACGATCA AAGCGCGAAA 
GTGGTTGCTA ACCAGATTAT CAACATGCTG GAAAGTAACT GA
 
Protein sequence
MAEKRNIFLV GPMGAGKSTI GRQLAQQLNM EFFDSDQEIE RRTGADVGWV FDVEGEEGFR 
DREEKVINEL TEKQGIVLAT GGGSVKSRET RNRLSARGVV VYLETTIEKQ LARTQRDKKR 
PLLQVDEPPR EVLEALAKER NPLYEEIADV TIRTDDQSAK VVANQIINML ESN