| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3956 |
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| Symbol | nirB |
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| ID | 5386641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 4437090 |
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| End bp | 4439636 |
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| Gene Length | 2547 bp |
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| Protein Length | 848 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640866987 |
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| Product | nitrite reductase [NAD(P)H], large subunit |
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| Protein accession | YP_001402904 |
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| Protein GI | 153949664 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1251] NAD(P)H-nitrite reductase |
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| TIGRFAM ID | [TIGR02374] nitrite reductase [NAD(P)H], large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA TAAAAATTGC CATCATTGGC AACGGCATGG TCGGCCACCG CTTTATCGAA
GACTTATTGG ATAAAGCGGA TAAGGACCAA TTTGATATAA CCGTATTTTG CGAAGAACCC
CGCATTGCTT ACGATCGTGT GCATCTTTCC TCTTACTTCT CTCATCATAC CGCAGAAGAA
CTGTCACTGG TTCGCGAAGG CTTTTATGAA AAACAGGGCG TGAAGGTGCT GGTGGGTGAA
CGCGCCATCA CGATCAACCG TGCTGAAAAA GTGATTCACT CCAACAGTGG CCGAAGCCTG
TATTACGACA AGTTGGTGAT GGCAACGGGT TCTTATCCGT GGATCCCACC TATTAAAGGT
AGCGAAGGGC AAGATTGCTT TGTTTACCGC ACCATTGAAG ACCTGAATGC CATTGAGGCC
TGTACCCGTC GCAGCAAACG TGGTGCCGTC ATTGGCGGTG GCCTATTAGG GCTGGAAGCC
GCAGGGGCAT TAAAGAGCCT CGGCGTTGAA ACCCATGTGA TTGAATTTGC TCCCGTCCTA
ATGGCTGAAC AGCTTGATCC GATGGGCGGT GACCAACTGC GTCAGAAAAT TGAACGCATG
GGGGTCAGAG TTCATACCGG TAAGAATACC CAAGAAATTG TACATTCCGG CCAAAATAGC
CGCAAAACCA TGTTGTTTGC TGATGGGACG CAGTTGGAAG TTGATTTTAT CGTCTTCTCC
ACCGGTATCC GTCCGCAGGA TAAACTGGCG AATCAATGTG GTTTAGCCAC TGCCCGCCGT
GGTGGTATTG CTATCAATGA TTATTGCCAG ACATCCGATC CTGATGTCTA CGCCATTGGC
GAGTGTGCGT CATGGCAGGA ACGAACTTTC GGGCTGGTCG CGCCGGGTTA TAAAATGGCG
CAGGTTGCCG CAGACCATCT GTTAGGCCGT GAGAATGCTT TCCTCGGTGC TGATATGAGC
GCCAAACTGA AGCTGCTGGG CGTGGATGTT GGCGGGATTG GTGATGCCCA TGGCCGTACT
GAAGGTGCAC GCAGCTACGT TTATCTGGAT GAAAGCAAAG AAATTTACAA GCGTTTGGTG
GTCAGTGCCG ATAACAAAAC CCTATTGGGT GCCGTACTGG TTGGCGATAC CACCGATTAC
GGTAATCTGC TGCAACTGGC GTTGAATAAC ATCACATTAC CGGAAAACCC AGACAGCCTG
ATCCTGCCCG CCCATGCAGG TAATAAACCC ACCATCGGGG TGGATTCCCT GCCAGATAGC
GCCCAGATTT GCTCCTGCTT TGACGTGACT AAAGGCGACA TTATTCGGGC GATTGGACAG
GGCTGCCAGA CTGTCGCCGC GCTAAAATCC GCGACCAAAG CCGGGACCGG TTGTGGCGGC
TGTATTCCGC TGGTCACCCA AGTATTGAAT GCCGAATTAA GTAAGCAAGG CATTGAAGTT
AATAATCATT TATGTGAACA CTTCGCCTAT TCACGCCAAG AACTGTATCA CTTGATCCGC
GTTGAAGGGA TTAAGACGTT TACCGAATTA CGGGAAAAAT ACGGCAAGGG CTACGGTTGT
GAAGTCTGTA AACCGACGGT CGGTTCACTA CTGGCGTCGT GCTGGAATGA GTATGTGCTG
GAGCCACAGC ATACGCCGTT GCAGGATACC AATGATAACT TCCTCGGTAA TATTCAGAAA
GATGGTACCT ACTCGATTAT TCCTCGTTCA CCAGGCGGTG AAATCACACC GGATGGCCTG
CTCGTCGTTG GTCAGATCGC CAAAGAATAT AACCTGTATA CCAAACTGAC CGGTTCCCAA
CGGATAGGGA TGTTTGGCGC ACAAAAAGAT GACCTACCGG CTATCTGGGC ACGGTTGATT
GACGCGGGCT TTGAAACGGG TCATGCCTAC GCCAAAGCAC TGCGTATGGC AAAAACCTGT
GTTGGCAGTA CCTGGTGCCG CTTCGGTGTC GGGGATAGCG TTGGCTTTGG TGTGGCCTTG
GAACATCGCT ACAAAGGTAT CCGCGCACCG CACAAAATAA AATTTGGCAT CTCTGGTTGT
ACCCGTGAAT GCGCAGAAGC TCAGGGCAAA GACGTGGGGA TCATCGCCAC TGAAAATGGC
TGGAATCTGT ATGTCTGCGG CAACGGCGGC ATGAAACCGC GTCACGCGGA TTTACTGGCA
GCCGATTTGG ATGAAGAGAC GCTAATGCGC TATCTCGACC GCTTTATGAT GTTCTACATC
CGCACCGCCG ATAAACTACA GCGCACCTCC GTCTGGCTGG AAAGCTTGGA AGGGGGGATT
CGCTACCTAC AATCGGTGAT CCTTGAGGAC AAACTGGGCA TTAACGATCA ACTGGAAGCA
GAGATCGCCC GTCTGCGCGA CAAGGTCGCC TGCGAGTGGA AAGCCACTGT CGAGAACCCA
GCAGCACAAG TGCGTTTTGC CCACTTTATT AATAGCTCAC TGCGTGACCC GAATGTACAA
GTCGTGCGCG AACGAGAGCA ACACCGCCCG GCCCGCCCAG ATGAACGCAT CCCGGTCAGG
GTTCTGGAAC TGGAGGATAA CGCATGA
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| Protein sequence | MSKIKIAIIG NGMVGHRFIE DLLDKADKDQ FDITVFCEEP RIAYDRVHLS SYFSHHTAEE
LSLVREGFYE KQGVKVLVGE RAITINRAEK VIHSNSGRSL YYDKLVMATG SYPWIPPIKG
SEGQDCFVYR TIEDLNAIEA CTRRSKRGAV IGGGLLGLEA AGALKSLGVE THVIEFAPVL
MAEQLDPMGG DQLRQKIERM GVRVHTGKNT QEIVHSGQNS RKTMLFADGT QLEVDFIVFS
TGIRPQDKLA NQCGLATARR GGIAINDYCQ TSDPDVYAIG ECASWQERTF GLVAPGYKMA
QVAADHLLGR ENAFLGADMS AKLKLLGVDV GGIGDAHGRT EGARSYVYLD ESKEIYKRLV
VSADNKTLLG AVLVGDTTDY GNLLQLALNN ITLPENPDSL ILPAHAGNKP TIGVDSLPDS
AQICSCFDVT KGDIIRAIGQ GCQTVAALKS ATKAGTGCGG CIPLVTQVLN AELSKQGIEV
NNHLCEHFAY SRQELYHLIR VEGIKTFTEL REKYGKGYGC EVCKPTVGSL LASCWNEYVL
EPQHTPLQDT NDNFLGNIQK DGTYSIIPRS PGGEITPDGL LVVGQIAKEY NLYTKLTGSQ
RIGMFGAQKD DLPAIWARLI DAGFETGHAY AKALRMAKTC VGSTWCRFGV GDSVGFGVAL
EHRYKGIRAP HKIKFGISGC TRECAEAQGK DVGIIATENG WNLYVCGNGG MKPRHADLLA
ADLDEETLMR YLDRFMMFYI RTADKLQRTS VWLESLEGGI RYLQSVILED KLGINDQLEA
EIARLRDKVA CEWKATVENP AAQVRFAHFI NSSLRDPNVQ VVREREQHRP ARPDERIPVR
VLELEDNA
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