| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3955 |
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| Symbol | codA |
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| ID | 5388486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4435470 |
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| End bp | 4436780 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640866986 |
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| Product | cytosine deaminase |
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| Protein accession | YP_001402903 |
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| Protein GI | 153948211 |
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| COG category | [F] Nucleotide transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0402] Cytosine deaminase and related metal-dependent hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 49 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGGCAT TGATGGCAGG GCAATCTGTA CCGAATTATT CATTAACGAC GGTAAATAAT
GTGCGTCGTA TAGGGTTAGC GGGGCTGTGG CAGATAACGA TAGCGGAAGG CAAAATCAGC
CTGATTCAGC CTCAGCCGGA GCAATCCCTA ACAGGGCAAG GTGTGCTGGA TGCGCAGGGC
GGTTTGGCGC TCCCGCCATT TATTGAGCCG CATATTCATC TGGATACGAC TCAAACCGCT
GGGCAACCGA GTTGGAATCA GTCGGGAACT CTGTTTGAGG GAATTGAACG TTGGGCGGAG
CGCAAAGCGC GACTAACGCG CGAGGATGTG AAGCAGCGGG CCTGGCAAAC ATTGAAATGG
CAGATAGCCA ACGGTATCCA GCATGTCCGA ACGCATGTTG ATGTTTCCGA TCCACACTTG
ACGGCATTGA GCGCCATGTT GGAGGTGAAA GAAGAGGTTA GCCCTTGGGT TGATATGCAG
ATTGTGGCTT TCCCACAAGA GGGCATCCTC TCTTATCCTG ATGGTGCGGC GTTATTGGAA
GAGGCACTGC GCTTGGGTGC GGATGCGGTG GGGGCGATCC CCCATTTTGA ATTTACCCGC
GAATATGGCG TGGAATCTTT GCATATCGCG TTTGCATTGG CGCAAAAATA TCAGCGGCTG
GTGGATGTTC ATTGCGATGA AACGGATGAT GAGCAATCGC GCTTTATCGA AACCGTGGCG
GCGCTGGCCC TTCGCGAAAA TATGGGCGCA CGGGTAACCG CCAGCCATAC CACGGCGATG
CACTCTTATA ATGGTGCCTA TACATCACGG CTGTTCCGCT TGCTGAAATT ATCGGGCATT
AATTTTGTCG CCAACCCGCT GGTGAATATT CATCTGCAAG GCCGTTTTGA TACTTATCCG
AAGCGGCGTG GTATCACGCG GGTCAAAGAG ATGTTGGCTG CCGAGATTAA TGTGTGCTTC
GGCCATGACG ATGTGTTCGA CCCGTGGTAT CCGCTAGGTA CCGCCAATAT GTTGCAGGTG
CTGCATATGG GATTACATAT TTGTCAGTTG ATGGGATATG AACAAATTAA TGATGGTCTG
AATCTGATAA CCACCCACAG TGCCAAGACG CTGAATTTAG CAGATTATGG TTTGCAGCCT
GGTAACCGCG CCAACCTGAT TATTCTACCC GCAGAAAATG GTTTTGATGC TCTACGGCGG
CAGGTTCCCG TCAGTTACTC TATTCGTCAT GGTGTGGTGA TCGCGAAGAC GCAACCCGCA
GAGAGCCGGA TATATCTGGG GCAGGAAGAG ATCGTGGATT TTCGGCGTTA A
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| Protein sequence | MEALMAGQSV PNYSLTTVNN VRRIGLAGLW QITIAEGKIS LIQPQPEQSL TGQGVLDAQG
GLALPPFIEP HIHLDTTQTA GQPSWNQSGT LFEGIERWAE RKARLTREDV KQRAWQTLKW
QIANGIQHVR THVDVSDPHL TALSAMLEVK EEVSPWVDMQ IVAFPQEGIL SYPDGAALLE
EALRLGADAV GAIPHFEFTR EYGVESLHIA FALAQKYQRL VDVHCDETDD EQSRFIETVA
ALALRENMGA RVTASHTTAM HSYNGAYTSR LFRLLKLSGI NFVANPLVNI HLQGRFDTYP
KRRGITRVKE MLAAEINVCF GHDDVFDPWY PLGTANMLQV LHMGLHICQL MGYEQINDGL
NLITTHSAKT LNLADYGLQP GNRANLIILP AENGFDALRR QVPVSYSIRH GVVIAKTQPA
ESRIYLGQEE IVDFRR
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