Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_3950 |
Symbol | ppiA |
ID | 5388173 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 4427907 |
End bp | 4428476 |
Gene Length | 570 bp |
Protein Length | 189 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 640866981 |
Product | peptidyl-prolyl cis-trans isomerase A (rotamase A) |
Protein accession | YP_001402898 |
Protein GI | 153950573 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 55 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTAAAC GTACTTTAGT GACCTTCATT GCCCTATGTT CCCTCAGCGC CGTAGCGCCT GCTGCTTTAG CTGCCGGTGA GCCTCATGTG TTGTTAACAA CGTCGGCCGG GAATATTGAG CTGGAGCTCA ATAGCCAGAA GGCACCCATT TCAACCCAGA ATTTCGTTGA TTATGTTAAC AATGGTTACT ATAACAACAC TATTTTCCAC CGTGTTATCC CTGGCTTTAT GATTCAAGGC GGCGGTTTTA CCGCAGATTT CAAAGAAAAA ACGCCTAAAA CACCAATCAA AAATGAAGCA GATAATGGCC TGCGTAACCT ACGTGGTACC ATTTCGATGG CCCGTACTGC AGATAAAGAC AGCGCCACCA GTCAGTTCTT CTTGAACGTG GCAGACAATG CTTTCCTTGA CCACGGCCAA CGTGACTTTG GTTATGCGGT ATTCGGTAAA GTCGTTAAAG GCATGGATGT CGTCGAAAAA ATTTCTCAGG TTCAGACAGA AAACGTCGGC CCTTATCAGA ATGTACCCGT TAAACCGATC ACTATCCTGT CAGCAAAAGT TTTACCTTAA
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Protein sequence | MFKRTLVTFI ALCSLSAVAP AALAAGEPHV LLTTSAGNIE LELNSQKAPI STQNFVDYVN NGYYNNTIFH RVIPGFMIQG GGFTADFKEK TPKTPIKNEA DNGLRNLRGT ISMARTADKD SATSQFFLNV ADNAFLDHGQ RDFGYAVFGK VVKGMDVVEK ISQVQTENVG PYQNVPVKPI TILSAKVLP
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