Gene YpsIP31758_3950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_3950 
SymbolppiA 
ID5388173 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand
Start bp4427907 
End bp4428476 
Gene Length570 bp 
Protein Length189 aa 
Translation table11 
GC content45% 
IMG OID640866981 
Productpeptidyl-prolyl cis-trans isomerase A (rotamase A) 
Protein accessionYP_001402898 
Protein GI153950573 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0652] Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones55 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTAAAC GTACTTTAGT GACCTTCATT GCCCTATGTT CCCTCAGCGC CGTAGCGCCT 
GCTGCTTTAG CTGCCGGTGA GCCTCATGTG TTGTTAACAA CGTCGGCCGG GAATATTGAG
CTGGAGCTCA ATAGCCAGAA GGCACCCATT TCAACCCAGA ATTTCGTTGA TTATGTTAAC
AATGGTTACT ATAACAACAC TATTTTCCAC CGTGTTATCC CTGGCTTTAT GATTCAAGGC
GGCGGTTTTA CCGCAGATTT CAAAGAAAAA ACGCCTAAAA CACCAATCAA AAATGAAGCA
GATAATGGCC TGCGTAACCT ACGTGGTACC ATTTCGATGG CCCGTACTGC AGATAAAGAC
AGCGCCACCA GTCAGTTCTT CTTGAACGTG GCAGACAATG CTTTCCTTGA CCACGGCCAA
CGTGACTTTG GTTATGCGGT ATTCGGTAAA GTCGTTAAAG GCATGGATGT CGTCGAAAAA
ATTTCTCAGG TTCAGACAGA AAACGTCGGC CCTTATCAGA ATGTACCCGT TAAACCGATC
ACTATCCTGT CAGCAAAAGT TTTACCTTAA
 
Protein sequence
MFKRTLVTFI ALCSLSAVAP AALAAGEPHV LLTTSAGNIE LELNSQKAPI STQNFVDYVN 
NGYYNNTIFH RVIPGFMIQG GGFTADFKEK TPKTPIKNEA DNGLRNLRGT ISMARTADKD
SATSQFFLNV ADNAFLDHGQ RDFGYAVFGK VVKGMDVVEK ISQVQTENVG PYQNVPVKPI
TILSAKVLP