| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3947 |
|---|
| Symbol | argD |
|---|
| ID | 5386712 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | - |
|---|
| Start bp | 4423871 |
|---|
| End bp | 4425088 |
|---|
| Gene Length | 1218 bp |
|---|
| Protein Length | 405 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640866978 |
|---|
| Product | bifunctional N-succinyldiaminopimelate-aminotransferase/ acetylornithine transaminase protein |
|---|
| Protein accession | YP_001402895 |
|---|
| Protein GI | 153947780 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4992] Ornithine/acetylornithine aminotransferase |
|---|
| TIGRFAM ID | [TIGR00707] acetylornithine and succinylornithine aminotransferases
[TIGR03246] succinylornithine transaminase family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACAGATA AGTTAGCAGT GAATCGCAAG ACATTCGATC AGGTCATTTT GCCTGTTTAT
GCACCCGCGC AGTTTATCCC AGTAAAAGGG AAAGGCAGCC GAGTGTGGGA TCAACAAGGT
ACGGAGTACA TTGATTTCGC CGGTGGCATT GCGGTTACCG CACTGGGCCA TTGCCATCCG
GCACTGGTAT CCGCATTGCA TCAGCAGGGT GAAACGTTGT GGCACACCAG TAATGTGTTT
ACCAATGAGC CAGCACTGCG TTTAGCACAG AAGCTGATTG CCGCAACCTT TGCTGACCGG
GTTTTCTTTG CCAACTCGGG TGCTGAAGCG AATGAAGCCG CATTTAAGTT AGCTCGCCAT
TACGCTATTG AGCGTCATAG CCCCTATAAA ACCAAGATTA TTGCTTTCCA CAATGCGTTT
CATGGCCGCA CCCTGTTTAC GGTCTCTGTC GGGGGGCAGC CAAAGTATTC CGATGGTTTT
GGCCCGAAAC CTGCGGATAT CATCCATGTC CCGTTTAATG ATCTGGCGGC AGTGAAAGCG
GTGATGGATG ATCACACCTG TGCCGTGGTA CTGGAACCGA TTCAGGGAGA GGGCGGGATC
ACTTCTGCCA CGCCAGAGTT CCTACAAGGG GTGCGCGCGT TGTGTGATCA ACATAACGCC
CTGCTGGTGT TTGATGAAGT GCAAAGCGGT ATGGGGCGCA GTGGCAAGTT GTTTAGCTAT
ATGCATTATG GTGTGACGCC GGATATCCTT ACCACAGCGA AGGCATTGGG CGGTGGCTTC
CCAATCAGTG CGATGCTAAC GACCGAAGAG ATCGCTTCAG TGATGACGGT GGGTGCCCAC
GGCACCACCT ATGGGGGTAA TCCTCTGGCC TGTGCGGTCG CTGAGGCCGC GTTGGATGTG
ATTAATACCC CTGAGGTACT TAATGGTATT GAACAGCGCC ATGGTCTGTT TGTGCAGGCG
CTACAAAGCA TCAACAGCAA GTATGATGTT TTCAGTGATA TTCGTGGTAT GGGGTTGTTG
ATTGGCGCGG AGTTAACCGC GAAATACCGG GGGCAGGCGC GTGAGTTCCT GGCCGCCGCT
GCCGCTAACG GCTTGATGAT CCTCAATGCG GGTCCAGATG TTCTGCGGTT AGCGCCCTCG
CTGGTGATTG AATTGGAGGA TATCCAGCAA GGGATGGGGC GGTTGGAGAA AGCAATGGCG
AGTGTGATCA AAGGTTAA
|
|---|
| Protein sequence | MTDKLAVNRK TFDQVILPVY APAQFIPVKG KGSRVWDQQG TEYIDFAGGI AVTALGHCHP
ALVSALHQQG ETLWHTSNVF TNEPALRLAQ KLIAATFADR VFFANSGAEA NEAAFKLARH
YAIERHSPYK TKIIAFHNAF HGRTLFTVSV GGQPKYSDGF GPKPADIIHV PFNDLAAVKA
VMDDHTCAVV LEPIQGEGGI TSATPEFLQG VRALCDQHNA LLVFDEVQSG MGRSGKLFSY
MHYGVTPDIL TTAKALGGGF PISAMLTTEE IASVMTVGAH GTTYGGNPLA CAVAEAALDV
INTPEVLNGI EQRHGLFVQA LQSINSKYDV FSDIRGMGLL IGAELTAKYR GQAREFLAAA
AANGLMILNA GPDVLRLAPS LVIELEDIQQ GMGRLEKAMA SVIKG
|
|---|
| |